Strain Fitness in Escherichia coli BL21 around ECD_02609

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
2,721,336	-		ECD_02608	0.46	-1.0
2,721,336	-		ECD_02608	0.46	-1.2
2,721,418	-		ECD_02608	0.51	-0.6
2,721,435	-		ECD_02608	0.52	+0.4
2,721,461	+		ECD_02608	0.53	-0.3
2,721,630	-		ECD_02608	0.63	-1.4
2,721,630	-		ECD_02608	0.63	-1.2
2,721,750	-		ECD_02608	0.70	-1.7
2,721,936	-		ECD_02608	0.81	-0.2
2,721,936	-		ECD_02608	0.81	-0.7
2,721,936	-		ECD_02608	0.81	-1.5
2,721,936	-		ECD_02608	0.81	-1.4
2,721,936	-		ECD_02608	0.81	-1.2
2,721,936	-		ECD_02608	0.81	-0.4
2,721,936	-		ECD_02608	0.81	-0.7
2,722,089	-				-1.3
2,722,089	-				-2.3
2,722,089	-				-1.7
2,722,089	-				-0.5
2,722,129	-				-1.9
2,722,129	-				-2.2
2,722,129	-				-1.1
2,722,182	-				-0.7
2,722,182	-				-0.1
2,722,182	-				-1.0
2,722,182	-				-0.5
2,722,261	+				-2.7
2,722,262	-				-0.9
2,722,265	-				+0.2
2,722,411	+				-0.7
2,722,411	+				-1.1
2,722,412	-				-1.7
2,722,412	-				-2.3
2,722,412	-				-0.1
2,722,412	-				+0.1
2,722,477	-		ECD_02609	0.12	-0.0
2,722,481	-		ECD_02609	0.12	+0.3
2,722,481	-		ECD_02609	0.12	-0.7
2,722,481	-		ECD_02609	0.12	+1.3
2,722,737	-		ECD_02609	0.27	-1.8
2,722,737	-		ECD_02609	0.27	+0.2
2,722,858	-		ECD_02609	0.33	-0.8
2,722,898	-		ECD_02609	0.35	-1.1
2,722,898	-		ECD_02609	0.35	-1.1
2,722,898	-		ECD_02609	0.35	-0.1
2,722,929	-		ECD_02609	0.37	-1.9
2,723,000	-		ECD_02609	0.41	-0.7
2,723,000	-		ECD_02609	0.41	-1.0
2,723,008	-		ECD_02609	0.42	-2.5
2,723,008	-		ECD_02609	0.42	+0.0
2,723,055	-		ECD_02609	0.44	-0.5
2,723,116	-		ECD_02609	0.48	-1.4
2,723,368	+		ECD_02609	0.62	-1.9
2,723,392	-		ECD_02609	0.63	-0.5
2,723,445	-		ECD_02609	0.66	-1.7
2,723,445	-		ECD_02609	0.66	-0.8
2,723,445	-		ECD_02609	0.66	+0.3
2,723,588	-		ECD_02609	0.74	-0.4
2,723,664	-		ECD_02609	0.78	-1.2
2,723,664	-		ECD_02609	0.78	+0.5
2,723,800	-		ECD_02609	0.86	-0.8
2,723,803	-		ECD_02609	0.86	-0.6
2,723,815	-		ECD_02609	0.86	-1.4
2,723,815	-		ECD_02609	0.86	-1.3
2,723,865	-		ECD_02609	0.89	-1.2
2,723,865	-		ECD_02609	0.89	-1.2
2,723,869	-		ECD_02609	0.89	-1.9
2,723,869	-		ECD_02609	0.89	-0.1
2,724,068	-				-1.5
2,724,078	-				+0.3
2,724,113	-				+0.0
2,724,130	-				+0.4
2,724,130	-				+0.5
2,724,179	-				-1.8
2,724,195	-				+1.4
2,724,314	+				+0.2
2,724,314	+				-0.3
2,724,366	-				+0.6
2,724,374	+				+0.7
2,724,374	+				-0.7
2,724,395	+				-0.5
2,724,449	+		ECD_02610	0.20	-0.3
2,724,449	+		ECD_02610	0.20	+0.9
2,724,479	+		ECD_02610	0.28	+0.1
2,724,547	+		ECD_02610	0.47	+0.2
2,724,547	+		ECD_02610	0.47	-0.1
2,724,570	+		ECD_02610	0.53	+0.2
2,724,570	+		ECD_02610	0.53	+0.4
2,724,570	+		ECD_02610	0.53	+0.5
2,724,570	+		ECD_02610	0.53	+0.4
2,724,571	-		ECD_02610	0.54	-0.0
2,724,571	-		ECD_02610	0.54	+0.6
2,724,571	-		ECD_02610	0.54	+0.5
2,724,592	-		ECD_02610	0.59	+0.4
2,724,602	+		ECD_02610	0.62	-0.4
2,724,603	-		ECD_02610	0.62	+0.3
2,724,697	+		ECD_02610	0.88	+0.9
2,724,697	+		ECD_02610	0.88	+0.2
2,724,697	+		ECD_02610	0.88	+0.5
2,724,722	+				+0.5
2,724,722	+				+0.3
2,724,722	+				-0.1
2,724,722	+				+0.3
2,724,723	-				+0.2
2,724,723	-				-0.1
2,724,723	-				+0.3
2,724,726	+				+0.4
2,724,726	+				-0.3
2,724,727	-				+0.6
2,724,727	-				+0.1
2,724,741	+				+0.8
2,724,741	+				-0.7
2,724,741	+				+0.2
2,724,742	-				-0.0
2,724,770	-				+0.4
2,724,773	+				+0.8
2,724,773	+				+0.4
2,724,779	+				+0.6
2,724,784	+				-0.4
2,724,839	-				+0.1
2,724,841	+				+0.2
2,724,841	+				+1.4
2,724,841	+				-0.2
2,724,841	+				+0.0
2,724,841	+				+0.1
2,724,841	+				-0.1
2,724,841	+				+0.7
2,724,842	-				-0.1
2,724,844	+				-0.1
2,724,844	+				+0.0
2,724,856	+				-0.1
2,724,964	-		ECD_02611	0.11	-0.2
2,724,965	+		ECD_02611	0.12	+0.7
2,724,965	+		ECD_02611	0.12	-0.0
2,724,965	+		ECD_02611	0.12	+0.3
2,724,965	+		ECD_02611	0.12	-0.5
2,724,965	+		ECD_02611	0.12	-0.4
2,724,965	+		ECD_02611	0.12	+0.3
2,724,965	+		ECD_02611	0.12	-0.9
2,724,965	+		ECD_02611	0.12	+1.4
2,724,965	+		ECD_02611	0.12	-0.4
2,724,965	+		ECD_02611	0.12	+0.7
2,724,965	+		ECD_02611	0.12	-0.4
2,724,965	+		ECD_02611	0.12	+0.3
2,724,965	+		ECD_02611	0.12	+0.9
2,724,965	+		ECD_02611	0.12	-0.4
2,724,966	-		ECD_02611	0.12	+0.3
2,724,966	-		ECD_02611	0.12	+0.5
2,724,966	-		ECD_02611	0.12	+0.7
2,724,966	-		ECD_02611	0.12	-1.0
2,724,966	-		ECD_02611	0.12	+0.4
2,724,966	-		ECD_02611	0.12	-0.0
2,724,967	+		ECD_02611	0.12	-0.3
2,724,967	+		ECD_02611	0.12	+0.2
2,724,967	+		ECD_02611	0.12	+0.5