Strain Fitness in Escherichia coli BL21 around ECD_02489

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
2,604,472	+		ECD_02488	0.18	-0.9
2,604,767	-		ECD_02488	0.44	-1.8
2,604,767	-		ECD_02488	0.44	-1.2
2,604,784	-		ECD_02488	0.45	-1.9
2,604,784	-		ECD_02488	0.45	-3.6
2,604,784	-		ECD_02488	0.45	-1.9
2,604,820	-		ECD_02488	0.48	-0.8
2,604,877	+		ECD_02488	0.53	-2.3
2,604,878	-		ECD_02488	0.53	-1.0
2,604,878	-		ECD_02488	0.53	-0.8
2,604,946	+		ECD_02488	0.59	-2.3
2,604,946	+		ECD_02488	0.59	-1.0
2,604,948	+		ECD_02488	0.59	-1.5
2,604,958	-		ECD_02488	0.60	-1.2
2,605,039	+		ECD_02488	0.67	-1.8
2,605,062	+		ECD_02488	0.69	-0.2
2,605,123	-		ECD_02488	0.74	+0.1
2,605,285	+		ECD_02488	0.88	-0.1
2,605,286	-		ECD_02488	0.88	+1.0
2,605,398	-				-0.2
2,605,461	-				-0.3
2,605,579	-		ECD_02489	0.10	-1.3
2,605,621	-		ECD_02489	0.14	-2.0
2,605,621	-		ECD_02489	0.14	-0.4
2,605,621	-		ECD_02489	0.14	-1.2
2,605,622	+		ECD_02489	0.14	-0.9
2,605,622	+		ECD_02489	0.14	-1.7
2,605,622	+		ECD_02489	0.14	-1.4
2,605,622	+		ECD_02489	0.14	-1.1
2,605,622	+		ECD_02489	0.14	-0.7
2,605,622	+		ECD_02489	0.14	-0.4
2,605,623	-		ECD_02489	0.14	-2.4
2,605,623	-		ECD_02489	0.14	-1.3
2,605,623	-		ECD_02489	0.14	-2.0
2,605,623	-		ECD_02489	0.14	-3.1
2,605,623	-		ECD_02489	0.14	-1.9
2,605,623	-		ECD_02489	0.14	-1.2
2,605,626	-		ECD_02489	0.15	-1.2
2,605,648	-		ECD_02489	0.17	-1.9
2,605,662	+		ECD_02489	0.18	-2.2
2,605,662	+		ECD_02489	0.18	-1.1
2,605,662	+		ECD_02489	0.18	-2.6
2,605,662	+		ECD_02489	0.18	-2.0
2,605,662	+		ECD_02489	0.18	-2.0
2,605,662	+		ECD_02489	0.18	-1.8
2,605,662	+		ECD_02489	0.18	-1.1
2,605,663	-		ECD_02489	0.18	-1.7
2,605,663	-		ECD_02489	0.18	+0.9
2,605,663	-		ECD_02489	0.18	-1.7
2,605,663	-		ECD_02489	0.18	-1.4
2,605,663	-		ECD_02489	0.18	-0.3
2,605,663	-		ECD_02489	0.18	-0.8
2,605,663	-		ECD_02489	0.18	-1.9
2,605,663	-		ECD_02489	0.18	-1.0
2,605,663	-		ECD_02489	0.18	-2.5
2,605,663	-		ECD_02489	0.18	-1.4
2,605,663	-		ECD_02489	0.18	-1.7
2,605,663	-		ECD_02489	0.18	-0.7
2,605,663	-		ECD_02489	0.18	-2.0
2,605,665	+		ECD_02489	0.18	-2.5
2,605,666	-		ECD_02489	0.18	-1.1
2,605,731	-		ECD_02489	0.24	-3.1
2,605,797	-		ECD_02489	0.30	-1.5
2,605,867	-		ECD_02489	0.36	-0.2
2,605,867	-		ECD_02489	0.36	-1.2
2,605,916	+		ECD_02489	0.40	-0.9
2,605,916	+		ECD_02489	0.40	-2.1
2,605,917	-		ECD_02489	0.41	-1.1
2,605,917	-		ECD_02489	0.41	-1.7
2,605,917	-		ECD_02489	0.41	-0.2
2,605,917	-		ECD_02489	0.41	-1.3
2,605,929	+		ECD_02489	0.42	-0.8
2,605,929	+		ECD_02489	0.42	-0.2
2,605,929	+		ECD_02489	0.42	-1.1
2,605,930	-		ECD_02489	0.42	-1.3
2,606,039	-		ECD_02489	0.51	-0.8
2,606,076	+		ECD_02489	0.55	-1.8
2,606,077	-		ECD_02489	0.55	-1.2
2,606,077	-		ECD_02489	0.55	-1.4
2,606,077	-		ECD_02489	0.55	-0.7
2,606,140	-		ECD_02489	0.60	+0.1
2,606,140	-		ECD_02489	0.60	-1.6
2,606,170	-		ECD_02489	0.63	-1.1
2,606,311	-		ECD_02489	0.76	-1.8
2,606,337	-		ECD_02489	0.78	-1.7
2,606,387	-		ECD_02489	0.82	-1.4
2,606,427	+		ECD_02489	0.86	-2.7
2,606,427	+		ECD_02489	0.86	-1.4
2,606,427	+		ECD_02489	0.86	-0.7
2,606,428	-		ECD_02489	0.86	-1.5
2,606,428	-		ECD_02489	0.86	-0.7
2,606,428	-		ECD_02489	0.86	-1.6
2,606,428	-		ECD_02489	0.86	-1.7
2,606,428	-		ECD_02489	0.86	-0.9
2,606,428	-		ECD_02489	0.86	-2.6
2,606,428	-		ECD_02489	0.86	-1.1
2,606,428	-		ECD_02489	0.86	-0.8
2,606,428	-		ECD_02489	0.86	-1.0
2,606,451	-		ECD_02489	0.88	-2.0
2,606,451	-		ECD_02489	0.88	-1.5
2,606,454	+		ECD_02489	0.88	-0.7
2,606,455	-		ECD_02489	0.89	-1.8
2,606,455	-		ECD_02489	0.89	-1.6
2,606,519	-				-1.3
2,606,519	-				-1.3
2,606,583	+				-0.8
2,606,584	-				-1.8
2,606,587	-				-1.0
2,606,587	-				-1.7
2,606,596	-				+0.4
2,606,671	+				+0.1
2,606,671	+				-0.4
2,606,671	+				-1.2
2,606,672	-				-0.1
2,606,672	-				-0.3
2,606,672	-				+0.2
2,606,694	-				+1.3
2,606,694	-				-0.3
2,606,752	+		ECD_02490	0.15	-2.0
2,606,753	-		ECD_02490	0.15	-0.1
2,606,753	-		ECD_02490	0.15	+0.6
2,606,871	-		ECD_02490	0.26	-0.3
2,606,938	+		ECD_02490	0.32	+0.0
2,606,941	-		ECD_02490	0.32	-0.1
2,606,941	-		ECD_02490	0.32	-0.5
2,606,941	-		ECD_02490	0.32	-0.0
2,606,999	+		ECD_02490	0.38	-0.7
2,607,000	-		ECD_02490	0.38	+0.4
2,607,000	-		ECD_02490	0.38	-0.2
2,607,071	-		ECD_02490	0.45	+0.7
2,607,167	-		ECD_02490	0.54	+0.1
2,607,191	-		ECD_02490	0.56	+0.0
2,607,208	-		ECD_02490	0.57	+0.5
2,607,208	-		ECD_02490	0.57	+0.0
2,607,218	-		ECD_02490	0.58	-0.3
2,607,306	-		ECD_02490	0.66	-0.0
2,607,306	-		ECD_02490	0.66	+0.1
2,607,338	-		ECD_02490	0.69	-0.3
2,607,342	-		ECD_02490	0.70	+0.8
2,607,399	+		ECD_02490	0.75	-0.6
2,607,447	+		ECD_02490	0.80	-1.4
2,607,447	+		ECD_02490	0.80	-1.4
2,607,491	+		ECD_02490	0.84	-0.5
2,607,491	+		ECD_02490	0.84	-1.3
2,607,492	-		ECD_02490	0.84	+0.1
2,607,492	-		ECD_02490	0.84	+0.1
2,607,492	-		ECD_02490	0.84	-0.5
2,607,492	-		ECD_02490	0.84	+0.5
2,607,492	-		ECD_02490	0.84	-0.8
2,607,492	-		ECD_02490	0.84	-0.0
2,607,492	-		ECD_02490	0.84	-0.4
2,607,492	-		ECD_02490	0.84	-1.1
2,607,495	-		ECD_02490	0.84	-0.5
2,607,527	-		ECD_02490	0.87	-0.7
2,607,527	-		ECD_02490	0.87	+0.3