Strain Fitness in Escherichia coli BL21 around ECD_02254
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
2,332,789 | + | +0.4 | |||
2,332,801 | + | -0.4 | |||
2,332,814 | + | -0.6 | |||
2,332,997 | - | ECD_02253 | 0.22 | -0.6 | |
2,332,997 | - | ECD_02253 | 0.22 | +0.2 | |
2,332,997 | - | ECD_02253 | 0.22 | +0.1 | |
2,333,002 | + | ECD_02253 | 0.23 | -0.2 | |
2,333,003 | - | ECD_02253 | 0.23 | -0.6 | |
2,333,003 | - | ECD_02253 | 0.23 | +0.5 | |
2,333,435 | + | ECD_02253 | 0.75 | +0.8 | |
2,333,466 | - | ECD_02253 | 0.79 | +0.2 | |
2,333,506 | - | ECD_02253 | 0.84 | +0.5 | |
2,333,515 | - | ECD_02253 | 0.85 | +0.6 | |
2,333,515 | - | ECD_02253 | 0.85 | +0.3 | |
2,333,818 | - | ECD_02254 | 0.16 | -1.7 | |
2,334,401 | + | ECD_02254 | 0.70 | -2.9 | |
2,334,402 | - | ECD_02254 | 0.70 | -1.9 | |
2,334,433 | - | ECD_02254 | 0.73 | -3.1 | |
2,334,821 | - | +0.7 | |||
2,334,887 | - | ECD_02255 | 0.14 | -0.5 | |
2,334,894 | - | ECD_02255 | 0.14 | -0.4 | |
2,334,894 | - | ECD_02255 | 0.14 | +0.4 | |
2,335,027 | - | ECD_02255 | 0.29 | +0.5 | |
2,335,049 | - | ECD_02255 | 0.31 | +0.5 | |
2,335,279 | + | ECD_02255 | 0.56 | -0.3 | |
2,335,419 | + | ECD_02255 | 0.71 | -0.3 | |
2,335,420 | - | ECD_02255 | 0.71 | +0.3 | |
2,335,557 | - | ECD_02255 | 0.85 | -0.5 | |
2,335,665 | - | +0.0 |
Or see this region's nucleotide sequence