Strain Fitness in Escherichia coli BL21 around ECD_02073
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
2,126,814 | - | -0.4 | |||
2,126,829 | + | +0.9 | |||
2,127,119 | + | ECD_02072 | 0.42 | +0.2 | |
2,127,226 | - | ECD_02072 | 0.54 | +1.0 | |
2,127,263 | + | ECD_02072 | 0.58 | +0.2 | |
2,127,363 | + | ECD_02072 | 0.69 | -0.3 | |
2,127,364 | - | ECD_02072 | 0.70 | -0.3 | |
2,127,364 | - | ECD_02072 | 0.70 | -0.4 | |
2,127,369 | - | ECD_02072 | 0.70 | +0.3 | |
2,127,410 | + | ECD_02072 | 0.75 | -0.6 | |
2,127,501 | + | ECD_02072 | 0.85 | +0.2 | |
2,127,630 | + | +1.2 | |||
2,127,810 | + | -0.7 | |||
2,127,882 | - | ECD_02073 | 0.14 | -1.0 | |
2,127,882 | - | ECD_02073 | 0.14 | +0.2 | |
2,127,883 | + | ECD_02073 | 0.14 | -1.8 | |
2,127,884 | - | ECD_02073 | 0.14 | -2.6 | |
2,127,884 | - | ECD_02073 | 0.14 | -0.9 | |
2,127,975 | - | ECD_02073 | 0.27 | -1.8 | |
2,128,010 | + | ECD_02073 | 0.32 | -1.1 | |
2,128,035 | + | ECD_02073 | 0.35 | -1.6 | |
2,128,315 | - | ECD_02073 | 0.74 | +0.6 |
Or see this region's nucleotide sequence