Strain Fitness in Escherichia coli BL21 around ECD_02051
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
2,103,159 | - | ECD_02050 | 0.29 | +1.1 | |
2,103,339 | - | ECD_02050 | 0.45 | +0.5 | |
2,103,973 | - | -0.3 | |||
2,103,987 | + | +0.0 | |||
2,103,987 | + | -0.4 | |||
2,104,190 | - | ECD_02051 | 0.11 | -0.1 | |
2,104,495 | - | ECD_02051 | 0.27 | -0.3 | |
2,104,551 | + | ECD_02051 | 0.29 | +0.8 | |
2,104,552 | - | ECD_02051 | 0.29 | +0.0 | |
2,104,631 | + | ECD_02051 | 0.33 | +0.6 | |
2,104,632 | - | ECD_02051 | 0.33 | -0.3 | |
2,104,656 | + | ECD_02051 | 0.35 | +0.4 | |
2,104,684 | + | ECD_02051 | 0.36 | +0.1 | |
2,104,812 | - | ECD_02051 | 0.42 | +0.4 | |
2,104,990 | + | ECD_02051 | 0.51 | -0.1 | |
2,104,991 | - | ECD_02051 | 0.51 | +0.9 | |
2,105,315 | + | ECD_02051 | 0.68 | -0.5 | |
2,105,371 | - | ECD_02051 | 0.70 | -1.5 | |
2,105,443 | - | ECD_02051 | 0.74 | +0.5 | |
2,105,746 | + | ECD_02051 | 0.89 | +1.3 | |
2,105,792 | - | -0.2 | |||
2,106,027 | - | -1.5 | |||
2,106,032 | - | +0.2 | |||
2,106,101 | + | -0.2 | |||
2,106,219 | + | ECD_02052 | 0.29 | -0.2 | |
2,106,219 | + | ECD_02052 | 0.29 | +0.1 | |
2,106,219 | + | ECD_02052 | 0.29 | +0.6 | |
2,106,226 | - | ECD_02052 | 0.30 | -0.1 | |
2,106,245 | + | ECD_02052 | 0.34 | -0.4 | |
2,106,494 | + | ECD_02052 | 0.88 | +0.1 |
Or see this region's nucleotide sequence