Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02045 and ECD_02046 are separated by 9 nucleotides ECD_02046 and ECD_02047 are separated by 60 nucleotides ECD_02047 and ECD_02048 are separated by 306 nucleotides
ECD_02045: ECD_02045 - molybdate metabolism regulator, at 2,091,337 to 2,095,131
_02045
ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773
_02046
ECD_02047: ECD_02047 - uncharacterized protein, at 2,098,834 to 2,099,151
_02047
ECD_02048: ECD_02048 - putative hexameric AAA+ MoxR family ATPase, at 2,099,458 to 2,100,546
_02048
Position (kb)
2095
2096
2097
2098
2099 Strain fitness (log2 ratio)
-1
0
1 at 2094.539 kb on - strand, within ECD_02045 at 2094.557 kb on + strand, within ECD_02045 at 2094.558 kb on - strand, within ECD_02045 at 2094.570 kb on + strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2095.104 kb on + strand at 2095.563 kb on - strand, within ECD_02046 at 2095.576 kb on + strand, within ECD_02046 at 2095.592 kb on - strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.896 kb on - strand, within ECD_02046 at 2095.899 kb on + strand, within ECD_02046 at 2095.919 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046 at 2096.269 kb on - strand, within ECD_02046 at 2096.269 kb on - strand, within ECD_02046 at 2096.367 kb on - strand, within ECD_02046 at 2096.616 kb on - strand, within ECD_02046 at 2096.664 kb on + strand, within ECD_02046 at 2096.723 kb on - strand, within ECD_02046 at 2096.807 kb on + strand, within ECD_02046 at 2096.842 kb on + strand, within ECD_02046 at 2096.843 kb on - strand, within ECD_02046 at 2097.162 kb on + strand, within ECD_02046 at 2097.663 kb on - strand, within ECD_02046 at 2097.774 kb on + strand, within ECD_02046 at 2098.140 kb on + strand, within ECD_02046 at 2098.582 kb on + strand at 2099.661 kb on + strand, within ECD_02048
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10 remove 2,094,539 - ECD_02045 0.84 -0.8 2,094,557 + ECD_02045 0.85 -0.3 2,094,558 - ECD_02045 0.85 +0.2 2,094,570 + ECD_02045 0.85 +0.6 2,094,593 - ECD_02045 0.86 -0.0 2,094,593 - ECD_02045 0.86 +0.7 2,095,104 + -0.7 2,095,563 - ECD_02046 0.12 -0.2 2,095,576 + ECD_02046 0.12 +0.5 2,095,592 - ECD_02046 0.12 +0.4 2,095,895 + ECD_02046 0.21 +0.7 2,095,895 + ECD_02046 0.21 +0.4 2,095,895 + ECD_02046 0.21 -0.1 2,095,896 - ECD_02046 0.21 +0.3 2,095,899 + ECD_02046 0.21 -0.4 2,095,919 - ECD_02046 0.21 -1.3 2,096,122 - ECD_02046 0.27 -0.9 2,096,122 - ECD_02046 0.27 -0.0 2,096,269 - ECD_02046 0.31 -0.1 2,096,269 - ECD_02046 0.31 -1.0 2,096,367 - ECD_02046 0.34 -0.3 2,096,616 - ECD_02046 0.41 +0.0 2,096,664 + ECD_02046 0.42 -0.5 2,096,723 - ECD_02046 0.44 +0.5 2,096,807 + ECD_02046 0.46 -0.7 2,096,842 + ECD_02046 0.47 -0.8 2,096,843 - ECD_02046 0.47 +0.2 2,097,162 + ECD_02046 0.56 -0.6 2,097,663 - ECD_02046 0.69 +0.4 2,097,774 + ECD_02046 0.72 -0.8 2,098,140 + ECD_02046 0.83 -0.2 2,098,582 + +0.7 2,099,661 + ECD_02048 0.19 +0.6
Or see this region's nucleotide sequence