Strain Fitness in Escherichia coli BL21 around ECD_01922
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,986,065 | + | -1.3 | |||
1,986,085 | - | ECD_01921 | 0.10 | -1.5 | |
1,986,556 | - | ECD_01921 | 0.62 | -0.4 | |
1,986,609 | + | ECD_01921 | 0.68 | -2.4 | |
1,986,676 | + | ECD_01921 | 0.76 | +0.0 | |
1,986,929 | + | -0.7 | |||
1,987,225 | + | ECD_01922 | 0.25 | +0.2 | |
1,987,287 | + | ECD_01922 | 0.30 | -1.8 | |
1,987,590 | + | ECD_01922 | 0.53 | +0.0 | |
1,987,829 | + | ECD_01922 | 0.71 | -3.5 | |
1,988,316 | - | ECD_01923 | 0.11 | -0.5 | |
1,988,399 | + | ECD_01923 | 0.18 | -2.6 | |
1,988,409 | - | ECD_01923 | 0.19 | -1.3 | |
1,988,418 | + | ECD_01923 | 0.20 | -1.1 | |
1,988,537 | + | ECD_01923 | 0.31 | -1.3 | |
1,988,538 | - | ECD_01923 | 0.31 | -1.5 | |
1,989,113 | - | ECD_01923 | 0.85 | -1.1 | |
1,989,133 | + | ECD_01923 | 0.87 | -0.8 |
Or see this region's nucleotide sequence