Strain Fitness in Escherichia coli BL21 around ECD_01591
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,645,297 | + | ECD_01590 | 0.47 | -0.9 | |
1,645,475 | - | ECD_01590 | 0.58 | +0.1 | |
1,645,691 | - | ECD_01590 | 0.72 | +0.5 | |
1,645,742 | + | ECD_01590 | 0.75 | +0.2 | |
1,645,743 | - | ECD_01590 | 0.75 | -0.4 | |
1,645,743 | - | ECD_01590 | 0.75 | -0.1 | |
1,645,889 | - | ECD_01590 | 0.84 | -0.1 | |
1,646,046 | + | +0.4 | |||
1,646,046 | + | +0.4 | |||
1,646,047 | - | +0.1 | |||
1,646,128 | + | +1.4 | |||
1,646,128 | + | +1.4 | |||
1,646,447 | - | ECD_01591 | 0.25 | -1.1 | |
1,646,526 | - | ECD_01591 | 0.32 | -0.0 | |
1,647,054 | - | ECD_01591 | 0.77 | -1.2 | |
1,648,007 | + | ECD_01592 | 0.58 | +0.0 |
Or see this region's nucleotide sequence