Strain Fitness in Escherichia coli BL21 around ECD_01318
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,391,063 | + | +0.8 | |||
1,391,084 | + | +0.4 | |||
1,391,116 | + | +0.2 | |||
1,391,127 | + | +0.1 | |||
1,391,555 | + | ECD_01317 | 0.72 | +0.4 | |
1,391,555 | + | ECD_01317 | 0.72 | +0.9 | |
1,391,555 | + | ECD_01317 | 0.72 | +0.5 | |
1,391,555 | + | ECD_01317 | 0.72 | +0.5 | |
1,391,649 | + | ECD_01317 | 0.89 | -2.6 | |
1,391,653 | + | ECD_01317 | 0.90 | +0.4 | |
1,392,049 | - | ECD_01318 | 0.26 | -0.1 | |
1,392,049 | - | ECD_01318 | 0.26 | +0.7 | |
1,392,247 | - | ECD_01318 | 0.42 | +0.6 | |
1,392,250 | - | ECD_01318 | 0.42 | +0.4 | |
1,392,262 | - | ECD_01318 | 0.43 | +0.6 | |
1,392,466 | - | ECD_01318 | 0.60 | +0.9 | |
1,393,310 | + | -1.0 | |||
1,393,352 | + | ECD_01319 | 0.14 | +0.9 | |
1,393,356 | + | ECD_01319 | 0.14 | +0.2 | |
1,393,414 | + | ECD_01319 | 0.20 | +0.5 | |
1,393,493 | + | ECD_01319 | 0.28 | +0.2 | |
1,393,543 | + | ECD_01319 | 0.33 | -0.0 | |
1,393,545 | + | ECD_01319 | 0.33 | -0.5 | |
1,393,545 | + | ECD_01319 | 0.33 | -0.0 | |
1,393,545 | + | ECD_01319 | 0.33 | -0.1 | |
1,393,545 | + | ECD_01319 | 0.33 | -0.4 | |
1,393,546 | - | ECD_01319 | 0.33 | -0.1 | |
1,393,547 | + | ECD_01319 | 0.33 | +0.2 |
Or see this region's nucleotide sequence