Strain Fitness in Escherichia coli BL21 around ECD_01167
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,230,025 | - | ECD_01166 | 0.89 | -0.3 | |
1,230,036 | - | ECD_01166 | 0.89 | +1.3 | |
1,230,036 | - | ECD_01166 | 0.89 | -0.9 | |
1,230,036 | - | ECD_01166 | 0.89 | +0.7 | |
1,230,052 | - | +0.2 | |||
1,230,155 | - | +0.5 | |||
1,230,252 | + | -0.1 | |||
1,230,579 | + | ECD_01167 | 0.29 | -0.6 | |
1,230,595 | + | ECD_01167 | 0.31 | -0.7 | |
1,231,186 | + | -0.1 | |||
1,231,262 | - | -0.2 | |||
1,231,262 | - | -0.2 | |||
1,231,263 | + | +0.2 | |||
1,231,313 | - | +2.4 | |||
1,231,575 | + | ECD_01168 | 0.40 | +0.3 | |
1,231,763 | + | ECD_01168 | 0.71 | +2.4 | |
1,231,907 | + | +0.7 | |||
1,231,994 | + | +0.0 |
Or see this region's nucleotide sequence