Strain Fitness in Escherichia coli BL21 around ECD_01162
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,222,102 | - | ECD_01161 | 0.50 | +0.3 | |
1,222,382 | - | ECD_01161 | 0.69 | +0.5 | |
1,222,501 | - | ECD_01161 | 0.76 | -1.2 | |
1,222,519 | - | ECD_01161 | 0.77 | +0.4 | |
1,222,546 | + | ECD_01161 | 0.79 | +0.2 | |
1,222,682 | - | ECD_01161 | 0.88 | +0.0 | |
1,223,026 | + | +0.4 | |||
1,223,172 | + | ECD_01162 | 0.12 | -1.6 | |
1,223,528 | + | ECD_01162 | 0.61 | -0.2 | |
1,223,662 | + | ECD_01162 | 0.80 | -0.9 | |
1,224,091 | - | ECD_01163 | 0.15 | +0.3 | |
1,224,317 | + | ECD_01163 | 0.30 | -1.8 | |
1,224,358 | - | ECD_01163 | 0.33 | -0.6 | |
1,224,405 | - | ECD_01163 | 0.36 | +0.7 | |
1,224,418 | - | ECD_01163 | 0.37 | +0.5 | |
1,224,420 | - | ECD_01163 | 0.37 | +0.0 | |
1,224,497 | + | ECD_01163 | 0.42 | +0.3 | |
1,224,764 | - | ECD_01163 | 0.59 | -0.2 |
Or see this region's nucleotide sequence