Strain Fitness in Escherichia coli BL21 around ECD_01102
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
1,165,177 | + | -0.1 | |||
1,165,182 | - | +0.3 | |||
1,165,183 | + | -1.7 | |||
1,165,698 | + | ECD_01101 | 0.77 | -0.8 | |
1,165,734 | + | ECD_01101 | 0.82 | -0.9 | |
1,165,734 | + | ECD_01101 | 0.82 | -0.3 | |
1,165,913 | + | ECD_01102 | 0.10 | +0.0 | |
1,166,069 | - | ECD_01102 | 0.29 | -0.9 | |
1,166,160 | + | ECD_01102 | 0.40 | +0.3 | |
1,166,164 | + | ECD_01102 | 0.41 | +0.9 | |
1,166,272 | + | ECD_01102 | 0.54 | +1.2 | |
1,166,314 | + | ECD_01102 | 0.59 | +0.3 | |
1,166,327 | + | ECD_01102 | 0.61 | -0.5 | |
1,166,475 | + | ECD_01102 | 0.79 | +0.1 | |
1,166,509 | + | ECD_01102 | 0.83 | -2.8 | |
1,166,635 | + | +0.4 | |||
1,166,638 | + | +0.0 | |||
1,166,767 | + | ECD_01103 | 0.10 | +0.0 | |
1,167,241 | - | ECD_01103 | 0.56 | -1.9 |
Or see this region's nucleotide sequence