Strain Fitness in Escherichia coli BL21 around ECD_00933
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
991,070 | - | -3.1 | |||
991,079 | - | -0.8 | |||
991,079 | - | -1.5 | |||
991,184 | - | ECD_00933 | 0.18 | -2.4 | |
991,331 | - | ECD_00933 | 0.32 | -2.6 | |
991,436 | - | ECD_00933 | 0.42 | -3.5 | |
991,476 | - | ECD_00933 | 0.45 | -0.6 | |
991,587 | - | ECD_00933 | 0.55 | -3.2 | |
991,592 | - | ECD_00933 | 0.56 | -2.4 | |
991,592 | - | ECD_00933 | 0.56 | -2.3 | |
991,596 | - | ECD_00933 | 0.56 | -2.8 | |
991,596 | - | ECD_00933 | 0.56 | -2.8 | |
991,637 | - | ECD_00933 | 0.60 | -2.1 | |
991,691 | - | ECD_00933 | 0.65 | -1.8 | |
991,703 | - | ECD_00933 | 0.66 | -2.4 | |
991,703 | - | ECD_00933 | 0.66 | -0.2 | |
991,739 | - | ECD_00933 | 0.69 | -3.4 | |
991,743 | - | ECD_00933 | 0.70 | -1.8 | |
991,743 | - | ECD_00933 | 0.70 | -0.8 | |
992,078 | - | -1.5 | |||
992,078 | - | -1.9 | |||
992,481 | - | +0.5 |
Or see this region's nucleotide sequence