Strain Fitness in Escherichia coli BL21 around ECD_00754

Experiment: Mixed culture, Halobacteriovorax-10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00753 and ECD_00754 are separated by 204 nucleotidesECD_00754 and ECD_00755 are separated by 35 nucleotidesECD_00755 and ECD_00756 overlap by 1 nucleotides ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580 _00753 ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498 _00754 ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490 _00755 ECD_00756: ECD_00756 - cardiolipin synthase 2, at 806,490 to 807,731 _00756 Position (kb) 804 805 806Strain fitness (log2 ratio) -1 0 1at 803.794 kb on - strandat 803.794 kb on - strandat 803.856 kb on + strandat 803.856 kb on + strandat 803.856 kb on + strandat 803.857 kb on - strandat 803.859 kb on - strandat 803.933 kb on + strandat 803.935 kb on + strandat 803.997 kb on - strand, within ECD_00753at 804.075 kb on + strand, within ECD_00753at 804.127 kb on - strand, within ECD_00753at 804.183 kb on + strand, within ECD_00753at 804.195 kb on - strand, within ECD_00753at 804.209 kb on - strand, within ECD_00753at 804.285 kb on + strand, within ECD_00753at 804.907 kb on + strand, within ECD_00754at 805.512 kb on + strandat 805.512 kb on + strandat 805.524 kb on + strandat 805.677 kb on + strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.678 kb on - strand, within ECD_00755at 805.759 kb on - strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.793 kb on + strand, within ECD_00755at 805.996 kb on - strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.097 kb on + strand, within ECD_00755at 806.307 kb on - strand, within ECD_00755at 806.403 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10
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803,794 - -0.3
803,794 - -0.1
803,856 + -0.5
803,856 + +0.4
803,856 + +0.3
803,857 - +0.0
803,859 - -1.2
803,933 + +0.4
803,935 + +0.4
803,997 - ECD_00753 0.17 +0.7
804,075 + ECD_00753 0.28 -0.9
804,127 - ECD_00753 0.36 -0.3
804,183 + ECD_00753 0.44 -0.2
804,195 - ECD_00753 0.45 +0.5
804,209 - ECD_00753 0.47 +0.6
804,285 + ECD_00753 0.58 +1.0
804,907 + ECD_00754 0.17 +0.8
805,512 + +0.6
805,512 + +0.2
805,524 + +0.6
805,677 + ECD_00755 0.15 -0.0
805,678 - ECD_00755 0.15 -0.2
805,678 - ECD_00755 0.15 -0.1
805,678 - ECD_00755 0.15 -0.2
805,678 - ECD_00755 0.15 -1.4
805,678 - ECD_00755 0.15 -0.4
805,759 - ECD_00755 0.24 -0.4
805,793 + ECD_00755 0.27 +0.3
805,793 + ECD_00755 0.27 -0.3
805,996 - ECD_00755 0.48 +0.8
806,097 + ECD_00755 0.59 +0.5
806,097 + ECD_00755 0.59 -0.6
806,307 - ECD_00755 0.81 +0.3
806,403 - +0.4

Or see this region's nucleotide sequence