Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00750 and ECD_00751 overlap by 8 nucleotides ECD_00751 and ECD_00752 are separated by 1 nucleotides ECD_00752 and ECD_00753 are separated by 135 nucleotides ECD_00753 and ECD_00754 are separated by 204 nucleotides ECD_00754 and ECD_00755 are separated by 35 nucleotides
ECD_00750: ECD_00750 - molybdopterin biosynthesis, protein C, at 802,563 to 803,048
_00750
ECD_00751: ECD_00751 - molybdopterin synthase, small subunit, at 803,041 to 803,286
_00751
ECD_00752: ECD_00752 - molybdopterin synthase, large subunit, at 803,288 to 803,740
_00752
ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580
_00753
ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498
_00754
ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490
_00755
Position (kb) 803
804
805 Strain fitness (log2 ratio) -1
0
1 at 802.941 kb on + strand, within ECD_00750 at 802.942 kb on - strand, within ECD_00750 at 803.284 kb on + strand at 803.627 kb on - strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.794 kb on - strand at 803.794 kb on - strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.857 kb on - strand at 803.859 kb on - strand at 803.933 kb on + strand at 803.935 kb on + strand at 803.997 kb on - strand, within ECD_00753 at 804.075 kb on + strand, within ECD_00753 at 804.127 kb on - strand, within ECD_00753 at 804.183 kb on + strand, within ECD_00753 at 804.195 kb on - strand, within ECD_00753 at 804.209 kb on - strand, within ECD_00753 at 804.285 kb on + strand, within ECD_00753 at 804.907 kb on + strand, within ECD_00754 at 805.512 kb on + strand at 805.512 kb on + strand at 805.524 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10 remove 802,941 + ECD_00750 0.78 +0.2 802,942 - ECD_00750 0.78 +0.1 803,284 + +0.5 803,627 - ECD_00752 0.75 +1.5 803,636 + ECD_00752 0.77 +0.2 803,636 + ECD_00752 0.77 +1.1 803,794 - -0.3 803,794 - -0.1 803,856 + -0.5 803,856 + +0.4 803,856 + +0.3 803,857 - +0.0 803,859 - -1.2 803,933 + +0.4 803,935 + +0.4 803,997 - ECD_00753 0.17 +0.7 804,075 + ECD_00753 0.28 -0.9 804,127 - ECD_00753 0.36 -0.3 804,183 + ECD_00753 0.44 -0.2 804,195 - ECD_00753 0.45 +0.5 804,209 - ECD_00753 0.47 +0.6 804,285 + ECD_00753 0.58 +1.0 804,907 + ECD_00754 0.17 +0.8 805,512 + +0.6 805,512 + +0.2 805,524 + +0.6
Or see this region's nucleotide sequence