Strain Fitness in Escherichia coli BL21 around ECD_00075

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
82,696	+		ECD_00074	0.30	-1.6
82,696	+		ECD_00074	0.30	-1.7
82,696	+		ECD_00074	0.30	-1.2
82,696	+		ECD_00074	0.30	-0.7
82,696	+		ECD_00074	0.30	-2.2
82,696	+		ECD_00074	0.30	-0.2
82,697	-		ECD_00074	0.31	-1.0
82,697	-		ECD_00074	0.31	-2.0
82,760	+		ECD_00074	0.35	-2.3
82,949	+		ECD_00074	0.49	-1.4
82,949	+		ECD_00074	0.49	-0.7
82,949	+		ECD_00074	0.49	-1.9
82,949	+		ECD_00074	0.49	-2.0
82,949	+		ECD_00074	0.49	-0.9
82,950	-		ECD_00074	0.49	-1.2
82,950	-		ECD_00074	0.49	-1.2
82,950	-		ECD_00074	0.49	-1.8
83,021	+		ECD_00074	0.54	-0.6
83,037	+		ECD_00074	0.55	-2.0
83,038	-		ECD_00074	0.55	-2.5
83,038	-		ECD_00074	0.55	-2.1
83,038	-		ECD_00074	0.55	-1.4
83,135	+		ECD_00074	0.62	-1.8
83,214	+		ECD_00074	0.67	-1.0
83,340	+		ECD_00074	0.76	-1.0
83,341	-		ECD_00074	0.77	-2.1
83,341	-		ECD_00074	0.77	-2.0
83,591	+				-1.3
83,592	-				-0.9
83,593	+				-1.9
83,593	+				-0.7
83,593	+				-1.5
83,594	-				-2.4
83,594	-				-1.9
83,595	+				-1.1
83,596	-				-0.8
83,596	-				-0.8
83,596	-				-1.9
83,655	+				-1.2
83,674	-				-0.2
83,674	-				-1.4
83,691	+				-1.5
83,925	+		ECD_00075	0.23	-1.6
83,925	+		ECD_00075	0.23	-1.5
83,926	-		ECD_00075	0.23	-1.0
83,926	-		ECD_00075	0.23	-2.0
84,090	+		ECD_00075	0.38	-1.7
84,090	+		ECD_00075	0.38	-1.3
84,090	+		ECD_00075	0.38	-2.0
84,090	+		ECD_00075	0.38	-1.5
84,091	-		ECD_00075	0.38	-1.7
84,091	-		ECD_00075	0.38	-0.6
84,091	-		ECD_00075	0.38	-1.8
84,091	-		ECD_00075	0.38	-1.5
84,091	-		ECD_00075	0.38	-1.3
84,091	-		ECD_00075	0.38	-1.9
84,091	-		ECD_00075	0.38	-1.6
84,091	-		ECD_00075	0.38	+0.4
84,094	+		ECD_00075	0.39	-1.0
84,094	+		ECD_00075	0.39	-2.2
84,095	-		ECD_00075	0.39	-1.4
84,095	-		ECD_00075	0.39	-1.0
84,095	-		ECD_00075	0.39	-1.8
84,241	+		ECD_00075	0.52	-0.4
84,264	+		ECD_00075	0.54	-1.3
84,264	+		ECD_00075	0.54	-1.0
84,265	-		ECD_00075	0.54	-1.5
84,330	+		ECD_00075	0.60	-1.5
84,330	+		ECD_00075	0.60	-2.1
84,330	+		ECD_00075	0.60	-2.0
84,513	-		ECD_00075	0.77	-1.3
84,513	-		ECD_00075	0.77	-1.5
84,629	+		ECD_00075	0.88	-1.8
84,637	-		ECD_00075	0.88	-0.3
84,750	+				-1.1
84,751	-				-1.2
84,841	-				-1.6
84,926	+		ECD_00076	0.10	-1.7
84,926	+		ECD_00076	0.10	-0.9
84,990	-		ECD_00076	0.14	-1.3
84,990	-		ECD_00076	0.14	-1.5
85,008	+		ECD_00076	0.16	-0.9
85,010	+		ECD_00076	0.16	-0.8
85,011	-		ECD_00076	0.16	+0.5
85,011	-		ECD_00076	0.16	-0.9
85,011	-		ECD_00076	0.16	-0.3
85,027	-		ECD_00076	0.17	-0.2
85,038	-		ECD_00076	0.17	-0.2
85,152	-		ECD_00076	0.25	-0.1
85,218	-		ECD_00076	0.29	-1.4
85,500	+		ECD_00076	0.47	-1.3
85,504	-		ECD_00076	0.47	-0.3
85,519	+		ECD_00076	0.48	-0.9
85,519	+		ECD_00076	0.48	-0.9
85,520	-		ECD_00076	0.48	-1.8
85,538	-		ECD_00076	0.49	-1.1
85,552	-		ECD_00076	0.50	-2.1
85,715	-		ECD_00076	0.61	-1.3
85,728	+		ECD_00076	0.61	-1.2
85,740	+		ECD_00076	0.62	-1.6
85,759	-		ECD_00076	0.63	-1.9