Strain Fitness in Escherichia coli BL21 around ECD_00003

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
1,814	+		ECD_00002	0.60	-2.3
1,814	+		ECD_00002	0.60	-2.0
1,821	-		ECD_00002	0.60	-1.5
1,828	+		ECD_00002	0.61	-1.7
1,828	+		ECD_00002	0.61	-1.2
1,828	+		ECD_00002	0.61	-1.6
1,829	-		ECD_00002	0.61	-2.2
1,829	-		ECD_00002	0.61	-1.4
1,883	-		ECD_00002	0.63	-3.4
2,026	-		ECD_00002	0.69	-1.8
2,097	+		ECD_00002	0.71	-0.6
2,098	-		ECD_00002	0.72	-1.6
2,100	+		ECD_00002	0.72	-2.1
2,100	+		ECD_00002	0.72	-2.0
2,101	-		ECD_00002	0.72	-2.7
2,101	-		ECD_00002	0.72	-1.8
2,138	+		ECD_00002	0.73	-2.6
2,138	+		ECD_00002	0.73	-1.1
2,139	-		ECD_00002	0.73	-1.6
2,148	+		ECD_00002	0.74	-1.0
2,149	-		ECD_00002	0.74	-1.7
2,259	+		ECD_00002	0.78	-1.7
2,260	-		ECD_00002	0.78	-2.4
2,328	+		ECD_00002	0.81	-2.2
2,330	+		ECD_00002	0.81	-2.2
2,379	-		ECD_00002	0.83	-2.2
2,568	+				-1.3
2,569	-				-1.7
2,569	-				-2.2
2,676	+				-2.2
2,678	+				-2.2
2,679	-				-1.0
2,685	+				-2.3
2,685	+				-0.8
2,685	+				-2.0
2,686	-				-1.8
2,767	+				-1.9
2,767	+				-0.1
2,768	-				-2.3
2,768	-				-2.1
2,771	+				-1.8
2,788	+				-0.1
2,789	-				-2.3
2,805	+				-0.6
2,903	+		ECD_00003	0.11	-2.3
2,903	+		ECD_00003	0.11	-2.0
2,903	+		ECD_00003	0.11	-1.4
2,904	-		ECD_00003	0.11	-2.1
3,154	-		ECD_00003	0.38	-2.0
3,218	-		ECD_00003	0.45	-0.4
3,249	+		ECD_00003	0.48	-3.0
3,250	-		ECD_00003	0.48	-1.6
3,339	+		ECD_00003	0.58	-1.5
3,443	-		ECD_00003	0.69	-2.3
3,443	-		ECD_00003	0.69	-3.0
3,651	+				-1.0
3,659	-				-0.9
3,659	-				-2.8
3,659	-				-0.3
3,659	-				-1.1
3,687	+				-3.2
3,687	+				-1.8
3,688	-				-1.0
3,719	+				-0.2
3,730	+				-0.2
3,743	-				-1.7
3,743	-				-1.6
4,245	+		ECD_00004	0.40	-1.6
4,245	+		ECD_00004	0.40	-1.0
4,245	+		ECD_00004	0.40	-1.1
4,246	-		ECD_00004	0.40	-2.0
4,246	-		ECD_00004	0.40	-1.2
4,409	-		ECD_00004	0.53	-2.6
4,409	-		ECD_00004	0.53	-1.0