Strain Fitness in Escherichia coli BL21 around ECD_04060

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,325,512	-		ECD_04059	0.40	+0.2
4,325,512	-		ECD_04059	0.40	-1.4
4,325,730	-		ECD_04059	0.61	+0.5
4,325,730	-		ECD_04059	0.61	+0.1
4,326,083	-				+0.6
4,326,571	+				-0.2
4,326,590	+				+0.6
4,326,598	-				+0.3
4,326,625	+				-0.0
4,326,637	+				-0.3
4,326,645	+		ECD_04060	0.10	+2.9
4,326,754	+		ECD_04060	0.18	+0.4
4,326,758	+		ECD_04060	0.18	-0.4
4,326,800	+		ECD_04060	0.21	+0.4
4,326,800	+		ECD_04060	0.21	+0.4
4,326,802	+		ECD_04060	0.22	-1.0
4,326,802	+		ECD_04060	0.22	+0.1
4,326,802	+		ECD_04060	0.22	-1.6
4,326,803	-		ECD_04060	0.22	-0.3
4,326,803	-		ECD_04060	0.22	-0.5
4,326,803	-		ECD_04060	0.22	-0.4
4,326,852	-		ECD_04060	0.25	+0.1
4,326,883	+		ECD_04060	0.27	+0.1
4,326,905	-		ECD_04060	0.29	+0.4
4,326,937	+		ECD_04060	0.31	-1.6
4,326,937	+		ECD_04060	0.31	+0.0
4,326,976	+		ECD_04060	0.34	+0.0
4,327,004	+		ECD_04060	0.36	-0.2
4,327,015	+		ECD_04060	0.37	+0.2
4,327,016	-		ECD_04060	0.37	+0.1
4,327,016	-		ECD_04060	0.37	+0.0
4,327,031	+		ECD_04060	0.38	+0.3
4,327,031	+		ECD_04060	0.38	+0.9
4,327,032	-		ECD_04060	0.38	-0.3
4,327,181	-		ECD_04060	0.49	+0.3
4,327,301	+		ECD_04060	0.57	-0.4
4,327,301	+		ECD_04060	0.57	+0.4
4,327,302	-		ECD_04060	0.57	-0.1
4,327,302	-		ECD_04060	0.57	-0.2
4,327,302	-		ECD_04060	0.57	+0.2
4,327,451	-		ECD_04060	0.68	+1.0
4,327,454	+		ECD_04060	0.68	+0.2
4,327,456	+		ECD_04060	0.68	-0.1
4,327,456	+		ECD_04060	0.68	-1.2
4,327,456	+		ECD_04060	0.68	-1.1
4,327,457	-		ECD_04060	0.68	+0.0
4,327,457	-		ECD_04060	0.68	+0.2
4,327,457	-		ECD_04060	0.68	+0.0
4,327,489	+		ECD_04060	0.71	-0.8
4,327,490	-		ECD_04060	0.71	+0.1
4,327,792	+				+0.1
4,327,809	+				-0.2
4,327,823	+				-0.1
4,327,823	+				+0.1
4,327,823	+				-0.7
4,327,823	+				-0.2
4,327,823	+				+0.2
4,327,823	+				-0.4
4,327,823	+				-0.1
4,327,823	+				+0.2
4,327,823	+				-0.8
4,327,823	+				+0.4
4,327,824	-				-0.0
4,327,824	-				+0.1
4,327,824	-				-0.0
4,327,824	-				-0.1
4,327,825	+				+0.4
4,327,825	+				+0.5
4,327,825	+				-0.3
4,327,825	+				+0.6
4,327,825	+				-0.4
4,327,825	+				-0.4
4,327,826	-				-0.3
4,327,826	-				+0.5
4,327,826	-				+0.3
4,327,826	-				-0.6
4,327,826	-				+0.1
4,327,895	+				+0.2
4,327,896	-				+0.3
4,327,912	+				+0.3
4,327,920	+				-0.4
4,327,924	+				+0.2
4,327,924	+				+0.2
4,327,924	+				+0.0
4,327,924	+				-0.1
4,327,924	+				-0.0
4,327,924	+				-0.6
4,328,083	+		ECD_04061	0.56	+0.3
4,328,083	+		ECD_04061	0.56	+0.3
4,328,084	-		ECD_04061	0.56	+0.3
4,328,084	-		ECD_04061	0.56	+0.3
4,328,123	+		ECD_04061	0.69	+0.1
4,328,124	-		ECD_04061	0.69	+0.2
4,328,124	-		ECD_04061	0.69	+0.2
4,328,235	+				+0.1
4,328,235	+				+0.1
4,328,257	+				-1.0
4,328,258	-				+0.2
4,328,258	-				+0.9
4,328,258	-				+0.5
4,328,304	+		ECD_04062	0.16	+0.5
4,328,357	+		ECD_04062	0.28	-0.3
4,328,396	+		ECD_04062	0.36	+0.5
4,328,453	-		ECD_04062	0.48	+0.2
4,328,655	+				-0.4
4,328,655	+				+0.1
4,328,690	+				-0.6
4,328,691	-				-0.3
4,328,691	-				-0.8
4,328,723	-				+1.0
4,328,723	-				-0.3