Strain Fitness in Escherichia coli BL21 around ECD_04056

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,321,961	+		ECD_04054	0.72	+0.2
4,321,961	+		ECD_04054	0.72	+0.8
4,321,962	-		ECD_04054	0.72	-0.1
4,322,061	-		ECD_04054	0.78	+0.6
4,322,081	+		ECD_04054	0.79	+0.4
4,322,081	+		ECD_04054	0.79	-0.0
4,322,081	+		ECD_04054	0.79	-0.3
4,322,084	+		ECD_04054	0.79	-0.0
4,322,084	+		ECD_04054	0.79	-0.2
4,322,085	-		ECD_04054	0.79	-1.0
4,322,085	-		ECD_04054	0.79	+0.2
4,322,114	+		ECD_04054	0.81	-0.4
4,322,130	+		ECD_04054	0.82	-0.1
4,322,131	-		ECD_04054	0.82	-0.7
4,322,137	+		ECD_04054	0.83	-0.3
4,322,138	-		ECD_04054	0.83	+0.3
4,322,203	+		ECD_04054	0.87	-0.4
4,322,260	+				+0.0
4,322,295	+				+1.1
4,322,296	-				+0.3
4,322,338	+				+0.4
4,322,338	+				-0.1
4,322,339	-				-0.6
4,322,339	-				-0.3
4,322,342	+				-0.3
4,322,387	-				-0.1
4,322,419	-				+0.4
4,322,425	-				-0.5
4,322,467	-				+0.4
4,322,528	-				+0.1
4,322,544	+				-0.3
4,322,544	+				-0.2
4,322,544	+				+0.4
4,322,545	-				+0.1
4,322,545	-				+0.6
4,322,589	+		ECD_04055	0.19	-0.4
4,322,589	+		ECD_04055	0.19	-0.1
4,322,589	+		ECD_04055	0.19	+1.9
4,322,596	+		ECD_04055	0.21	+0.2
4,322,647	+		ECD_04055	0.40	+0.3
4,322,683	+		ECD_04055	0.53	-0.3
4,322,769	+		ECD_04055	0.84	+0.2
4,322,770	-		ECD_04055	0.84	+0.9
4,322,778	-		ECD_04055	0.87	-0.6
4,322,802	-				+0.0
4,322,802	-				+0.2
4,322,868	-				+0.9
4,322,868	-				-0.3
4,322,896	-				-0.1
4,322,908	+				+0.1
4,322,935	-				+0.1
4,322,935	-				+0.0
4,322,945	-				+0.4
4,322,945	-				-0.1
4,322,945	-				+0.1
4,322,945	-				-0.1
4,322,948	+				-0.1
4,322,948	+				-0.8
4,322,948	+				-0.1
4,322,948	+				-0.2
4,322,948	+				+0.7
4,322,949	-				-0.2
4,322,949	-				+0.4
4,323,034	+		ECD_04056	0.22	+0.0
4,323,038	-		ECD_04056	0.23	+0.4
4,323,078	+		ECD_04056	0.35	+0.6
4,323,115	-		ECD_04056	0.47	-0.2
4,323,123	+		ECD_04056	0.49	+0.3
4,323,124	-		ECD_04056	0.49	-1.6
4,323,201	-		ECD_04056	0.73	+0.3
4,323,215	+		ECD_04056	0.77	-0.2
4,323,226	-		ECD_04056	0.80	+0.7
4,323,260	-				-0.0
4,323,263	+				+0.2
4,323,272	+				+0.7
4,323,273	-				+0.2
4,323,291	-				+0.3
4,323,291	-				+0.0
4,323,306	+				-0.4
4,323,306	+				-0.6
4,323,312	-				-0.3
4,323,398	+				-0.4
4,323,405	+				+0.6
4,323,406	-				+0.3
4,323,406	-				+0.8
4,323,449	+				-0.2
4,323,449	+				+0.2
4,323,505	-				+0.6
4,323,523	+				+0.4
4,323,580	-		ECD_04057	0.14	-0.1
4,323,598	+		ECD_04057	0.17	-0.2
4,323,599	-		ECD_04057	0.17	+0.3
4,323,599	-		ECD_04057	0.17	-0.1
4,323,599	-		ECD_04057	0.17	+0.7
4,323,599	-		ECD_04057	0.17	-0.9
4,323,599	-		ECD_04057	0.17	-0.2
4,323,600	+		ECD_04057	0.17	-0.2
4,323,600	+		ECD_04057	0.17	-0.2
4,323,600	+		ECD_04057	0.17	+0.5
4,323,600	+		ECD_04057	0.17	+0.6
4,323,600	+		ECD_04057	0.17	+1.0
4,323,600	+		ECD_04057	0.17	-0.1
4,323,600	+		ECD_04057	0.17	-0.1
4,323,601	-		ECD_04057	0.17	+0.1
4,323,601	-		ECD_04057	0.17	-0.3
4,323,604	+		ECD_04057	0.18	+0.4
4,323,605	-		ECD_04057	0.18	-0.1
4,323,726	-		ECD_04057	0.34	+0.1
4,323,732	+		ECD_04057	0.35	+0.5
4,323,733	-		ECD_04057	0.35	+0.6
4,323,753	-		ECD_04057	0.37	+0.0
4,323,753	-		ECD_04057	0.37	+0.2
4,323,753	-		ECD_04057	0.37	-0.4
4,323,900	+		ECD_04057	0.57	-0.3
4,323,900	+		ECD_04057	0.57	-0.2
4,323,901	-		ECD_04057	0.57	-0.3
4,323,901	-		ECD_04057	0.57	-0.2
4,323,936	-		ECD_04057	0.62	+0.1
4,324,023	+		ECD_04057	0.73	+0.2
4,324,024	-		ECD_04057	0.74	-0.4
4,324,038	-		ECD_04057	0.75	-0.6
4,324,038	-		ECD_04057	0.75	+0.1
4,324,088	+		ECD_04057	0.82	-0.7
4,324,171	-				+0.4
4,324,185	-				+0.2