Strain Fitness in Escherichia coli BL21 around ECD_03880

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,109,021	+		ECD_03878	0.58	+0.5
4,109,021	+		ECD_03878	0.58	-0.4
4,109,022	-		ECD_03878	0.58	+0.4
4,109,022	-		ECD_03878	0.58	+0.4
4,109,023	+		ECD_03878	0.58	+0.3
4,109,056	-		ECD_03878	0.63	+0.1
4,109,066	+		ECD_03878	0.64	-2.5
4,109,067	-		ECD_03878	0.65	-0.0
4,109,255	+				+0.0
4,109,255	+				+0.6
4,109,256	-				-0.1
4,109,316	+				+0.4
4,109,316	+				+0.0
4,109,408	-		ECD_03879	0.22	+0.3
4,109,423	+		ECD_03879	0.26	-0.4
4,109,433	-		ECD_03879	0.28	+0.0
4,109,517	+		ECD_03879	0.48	+0.7
4,109,517	+		ECD_03879	0.48	+0.4
4,109,518	-		ECD_03879	0.48	+0.4
4,109,518	-		ECD_03879	0.48	-0.3
4,109,518	-		ECD_03879	0.48	-0.4
4,109,569	-		ECD_03879	0.60	-0.6
4,109,641	+		ECD_03879	0.78	+0.3
4,109,641	+		ECD_03879	0.78	+0.2
4,109,642	-		ECD_03879	0.78	+0.5
4,109,642	-		ECD_03879	0.78	-0.1
4,109,642	-		ECD_03879	0.78	+0.1
4,109,759	-				+0.1
4,109,980	+				+0.5
4,109,980	+				-0.7
4,109,981	-				-0.3
4,109,992	+				-0.2
4,109,992	+				-0.5
4,109,992	+				-0.4
4,109,993	-				+0.6
4,110,003	+				-0.4
4,110,003	+				+1.1
4,110,007	+				-0.9
4,110,008	-				-0.2
4,110,008	-				+0.0
4,110,135	+		ECD_03880	0.12	+0.1
4,110,135	+		ECD_03880	0.12	+0.0
4,110,136	-		ECD_03880	0.12	-0.4
4,110,136	-		ECD_03880	0.12	+0.1
4,110,136	-		ECD_03880	0.12	+0.1
4,110,140	-		ECD_03880	0.12	+0.3
4,110,241	-		ECD_03880	0.20	+0.8
4,110,286	+		ECD_03880	0.23	-0.4
4,110,286	+		ECD_03880	0.23	+1.3
4,110,286	+		ECD_03880	0.23	+0.4
4,110,287	-		ECD_03880	0.23	+0.8
4,110,287	-		ECD_03880	0.23	-0.1
4,110,287	-		ECD_03880	0.23	-0.2
4,110,317	+		ECD_03880	0.25	+0.1
4,110,343	-		ECD_03880	0.27	-1.3
4,110,343	-		ECD_03880	0.27	-0.1
4,110,343	-		ECD_03880	0.27	+0.5
4,110,410	+		ECD_03880	0.32	+0.6
4,110,460	+		ECD_03880	0.35	+0.6
4,110,461	-		ECD_03880	0.36	-0.4
4,110,471	-		ECD_03880	0.36	-0.1
4,110,471	-		ECD_03880	0.36	+0.2
4,110,514	+		ECD_03880	0.39	+1.6
4,110,559	+		ECD_03880	0.43	-1.0
4,110,560	-		ECD_03880	0.43	+0.7
4,110,614	+		ECD_03880	0.47	+0.3
4,110,739	+		ECD_03880	0.56	+0.3
4,110,740	-		ECD_03880	0.56	+0.4
4,110,755	+		ECD_03880	0.57	-0.0
4,110,755	+		ECD_03880	0.57	+0.1
4,110,755	+		ECD_03880	0.57	+0.2
4,110,924	+		ECD_03880	0.69	-0.4
4,110,925	-		ECD_03880	0.69	+0.2
4,110,934	-		ECD_03880	0.70	+0.5
4,111,044	-		ECD_03880	0.78	+1.5
4,111,055	-		ECD_03880	0.79	+0.2
4,111,055	-		ECD_03880	0.79	-1.0
4,111,085	-		ECD_03880	0.81	+0.4
4,111,234	+				+0.2
4,111,235	-				+0.5
4,111,258	+				-0.1
4,111,258	+				-0.0
4,111,259	-				+0.2
4,111,259	-				-0.4
4,111,259	-				-0.1
4,111,324	+				+0.1
4,111,401	+				-0.1
4,111,416	-				-0.3
4,111,416	-				-0.3
4,111,433	-				-0.0
4,111,434	+				+0.2
4,111,590	+		ECD_03881	0.18	+1.3
4,111,623	-		ECD_03881	0.21	+0.7
4,111,652	-		ECD_03881	0.23	+0.6
4,111,682	+		ECD_03881	0.25	-0.7
4,111,713	+		ECD_03881	0.28	+0.2
4,111,713	+		ECD_03881	0.28	-0.1
4,111,714	-		ECD_03881	0.28	-0.3
4,111,714	-		ECD_03881	0.28	-0.1
4,111,722	+		ECD_03881	0.28	+0.6
4,111,722	+		ECD_03881	0.28	+0.3
4,111,723	-		ECD_03881	0.29	-1.5
4,112,077	-		ECD_03881	0.55	+0.5
4,112,154	+		ECD_03881	0.61	+0.2
4,112,299	-		ECD_03881	0.72	+0.7
4,112,344	-		ECD_03881	0.75	+0.1