Strain Fitness in Escherichia coli BL21 around ECD_03681

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,881,044	-				-0.2
3,881,053	-				+0.1
3,881,113	-				-0.7
3,881,113	-				+0.4
3,881,132	-				-0.5
3,881,179	-				-0.1
3,881,179	-				-0.4
3,881,179	-				-0.2
3,881,209	+				-0.1
3,881,209	+				+0.0
3,881,210	-				-0.3
3,881,217	+				+0.2
3,881,217	+				-0.6
3,881,217	+				-0.4
3,881,217	+				+0.4
3,881,217	+				-0.2
3,881,218	-				-0.3
3,881,218	-				+0.0
3,881,218	-				-0.7
3,881,218	-				+0.3
3,881,221	+				+0.6
3,881,221	+				+0.8
3,881,221	+				+0.0
3,881,222	-				-0.0
3,881,236	+				+0.4
3,881,340	+				-0.5
3,881,417	+				-0.9
3,881,426	+				-0.5
3,881,426	+				-1.7
3,881,432	+				+0.3
3,881,434	+				-0.4
3,882,682	+		ECD_03681	0.49	-0.1
3,882,682	+		ECD_03681	0.49	-0.9
3,882,682	+		ECD_03681	0.49	-0.7
3,882,682	+		ECD_03681	0.49	-0.8
3,882,776	-		ECD_03681	0.53	-1.6
3,882,779	+		ECD_03681	0.53	-0.3
3,882,780	-		ECD_03681	0.53	-0.3
3,882,821	+		ECD_03681	0.55	-0.4
3,882,821	+		ECD_03681	0.55	-0.4
3,882,822	-		ECD_03681	0.55	+0.0
3,882,822	-		ECD_03681	0.55	-0.6
3,882,822	-		ECD_03681	0.55	+0.4
3,882,872	+		ECD_03681	0.57	+0.7
3,882,873	-		ECD_03681	0.57	+0.5
3,882,944	+		ECD_03681	0.60	-0.4
3,882,944	+		ECD_03681	0.60	+0.0
3,882,945	-		ECD_03681	0.60	-2.1
3,882,945	-		ECD_03681	0.60	-1.0
3,882,946	+		ECD_03681	0.60	-0.1
3,882,946	+		ECD_03681	0.60	-1.0
3,882,946	+		ECD_03681	0.60	-3.0
3,882,949	+		ECD_03681	0.60	-0.7
3,883,052	+		ECD_03681	0.64	-0.1
3,883,100	+		ECD_03681	0.66	-1.8
3,883,101	-		ECD_03681	0.66	-0.1
3,883,240	+		ECD_03681	0.71	+0.6
3,883,346	+		ECD_03681	0.76	-1.2
3,883,405	+		ECD_03681	0.78	-0.4
3,883,506	+		ECD_03681	0.82	-0.1
3,883,507	-		ECD_03681	0.82	-0.2
3,883,542	-		ECD_03681	0.83	-1.0
3,883,549	+		ECD_03681	0.83	+0.3
3,883,549	+		ECD_03681	0.83	-0.1
3,883,688	-		ECD_03681	0.89	-0.2
3,883,694	+		ECD_03681	0.89	+0.5
3,883,694	+		ECD_03681	0.89	+0.1
3,883,694	+		ECD_03681	0.89	-0.5
3,883,695	-		ECD_03681	0.89	-0.3
3,883,695	-		ECD_03681	0.89	+0.3
3,883,695	-		ECD_03681	0.89	+0.5
3,883,727	+				+0.3
3,883,727	+				+0.4
3,883,728	-				-0.2
3,883,728	-				-0.9
3,883,728	-				-0.7
3,883,728	-				-0.8
3,883,781	+				+0.4
3,883,782	-				-0.5
3,883,809	-				+0.1
3,883,848	-				-0.3
3,883,950	+				+0.2
3,883,950	+				+0.3
3,883,951	-				-0.1
3,883,951	-				+0.1
3,883,951	-				-0.9
3,884,084	-		ECD_03682	0.23	+0.2
3,884,180	-				-0.1
3,884,207	-				-0.7
3,884,335	+				-0.1
3,884,335	+				-0.6
3,884,362	+				-0.5
3,884,363	-				+0.3
3,884,442	+				+0.2
3,884,442	+				+0.1
3,884,442	+				-0.1
3,884,443	-				+0.6
3,884,443	-				-0.2
3,884,443	-				-0.3
3,884,445	+				+0.4
3,884,445	+				+0.1
3,884,446	-				-0.1
3,884,446	-				-0.3
3,884,446	-				-0.5
3,884,451	+				+0.3
3,884,451	+				-0.2
3,884,452	-				+0.2
3,884,452	-				-0.3
3,884,452	-				-0.6
3,884,452	-				-0.4
3,884,452	-				+0.4
3,884,452	-				-0.0
3,884,453	+				+0.0
3,884,454	-				+0.8
3,884,455	+				+0.5
3,884,456	-				+0.1
3,884,456	-				+0.2
3,884,490	-				+0.7
3,884,520	+				+0.5
3,884,521	-				+1.9
3,884,523	+				+0.2
3,884,523	+				+0.3
3,884,523	+				+0.5
3,884,610	+				+0.3
3,884,611	-				+1.2
3,884,647	-				-0.0
3,884,659	+				-0.2
3,884,659	+				-0.4
3,884,660	-				+0.3
3,884,674	-				-0.3
3,884,682	+				-0.2
3,884,683	-				+0.2
3,884,760	+				+0.1
3,884,760	+				-0.5
3,884,761	-				-0.2
3,884,813	+				+0.1
3,884,813	+				+0.3
3,884,827	+		ECD_03684	0.14	+0.5
3,884,827	+		ECD_03684	0.14	-0.1
3,884,827	+		ECD_03684	0.14	+0.8
3,884,830	+		ECD_03684	0.15	+0.3
3,884,834	+		ECD_03684	0.17	+0.4
3,884,834	+		ECD_03684	0.17	+0.1
3,884,834	+		ECD_03684	0.17	-0.4
3,884,894	+		ECD_03684	0.47	+0.3
3,884,895	-		ECD_03684	0.47	+0.4