Strain Fitness in Escherichia coli BL21 around ECD_03318

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,467,898	+		ECD_03316	0.73	-0.3
3,467,898	+		ECD_03316	0.73	-0.2
3,467,926	-		ECD_03316	0.81	-0.4
3,468,029	+				+0.4
3,468,029	+				+0.8
3,468,041	+				-0.9
3,468,041	+				-0.4
3,468,041	+				-0.9
3,468,041	+				+1.0
3,468,042	-				+0.1
3,468,042	-				-0.4
3,468,091	+				-0.0
3,468,132	-				+0.1
3,468,287	+		ECD_03317	0.24	+0.4
3,468,287	+		ECD_03317	0.24	-0.3
3,468,288	-		ECD_03317	0.24	+0.3
3,468,288	-		ECD_03317	0.24	-0.6
3,468,288	-		ECD_03317	0.24	-1.1
3,468,291	+		ECD_03317	0.25	+0.5
3,468,292	-		ECD_03317	0.25	-0.5
3,468,292	-		ECD_03317	0.25	+0.2
3,468,292	-		ECD_03317	0.25	-0.4
3,468,292	-		ECD_03317	0.25	-0.1
3,468,366	+		ECD_03317	0.37	-0.0
3,468,366	+		ECD_03317	0.37	+0.1
3,468,367	-		ECD_03317	0.37	-0.9
3,468,402	+		ECD_03317	0.43	-0.6
3,468,402	+		ECD_03317	0.43	+0.3
3,468,402	+		ECD_03317	0.43	+0.7
3,468,403	-		ECD_03317	0.43	+0.4
3,468,403	-		ECD_03317	0.43	+0.0
3,468,403	-		ECD_03317	0.43	-0.5
3,468,412	-		ECD_03317	0.44	-0.3
3,468,517	-		ECD_03317	0.61	+0.4
3,468,527	+		ECD_03317	0.63	+0.1
3,468,528	-		ECD_03317	0.63	-0.1
3,468,641	+		ECD_03317	0.81	-0.3
3,468,641	+		ECD_03317	0.81	+0.3
3,468,648	-		ECD_03317	0.82	+0.7
3,468,648	-		ECD_03317	0.82	+0.2
3,468,718	-				+0.0
3,468,753	+				-0.8
3,468,762	+				+0.5
3,468,985	-				-1.2
3,469,031	+				-1.3
3,469,032	-				+1.9
3,469,032	-				+0.9
3,469,231	-		ECD_03318	0.18	-1.4
3,469,276	-		ECD_03318	0.20	-0.3
3,469,372	+		ECD_03318	0.24	-1.7
3,469,372	+		ECD_03318	0.24	-1.4
3,469,372	+		ECD_03318	0.24	-0.5
3,469,372	+		ECD_03318	0.24	-1.4
3,469,373	-		ECD_03318	0.24	-1.0
3,469,408	-		ECD_03318	0.26	-0.2
3,469,735	-		ECD_03318	0.41	-1.8
3,469,890	+		ECD_03318	0.48	-1.3
3,469,894	+		ECD_03318	0.48	-0.8
3,469,894	+		ECD_03318	0.48	-1.5
3,469,895	-		ECD_03318	0.48	-0.7
3,469,895	-		ECD_03318	0.48	-1.8
3,469,895	-		ECD_03318	0.48	-1.9
3,469,980	+		ECD_03318	0.52	-1.9
3,470,021	+		ECD_03318	0.54	-0.7
3,470,026	-		ECD_03318	0.54	-0.5
3,470,046	+		ECD_03318	0.55	-0.7
3,470,089	-		ECD_03318	0.57	-1.5
3,470,114	+		ECD_03318	0.58	-1.2
3,470,114	+		ECD_03318	0.58	-0.1
3,470,114	+		ECD_03318	0.58	-0.1
3,470,115	-		ECD_03318	0.58	-0.8
3,470,142	+		ECD_03318	0.59	-1.3
3,470,167	-		ECD_03318	0.61	-0.2
3,470,471	+		ECD_03318	0.74	-0.7
3,470,475	+		ECD_03318	0.75	-1.2
3,470,475	+		ECD_03318	0.75	-0.4
3,470,475	+		ECD_03318	0.75	-1.2
3,470,475	+		ECD_03318	0.75	-0.7
3,470,475	+		ECD_03318	0.75	-1.1
3,470,475	+		ECD_03318	0.75	-0.5
3,470,476	-		ECD_03318	0.75	-2.4
3,470,476	-		ECD_03318	0.75	-0.8
3,470,476	-		ECD_03318	0.75	-0.8
3,470,476	-		ECD_03318	0.75	-0.8
3,470,895	+				-0.7
3,471,146	+				-0.4
3,471,147	-				+0.4
3,471,410	+				+0.2
3,471,416	-				+0.3
3,471,484	+				+0.1
3,471,484	+				-0.3
3,471,492	+				-0.3
3,471,530	+				-0.0
3,471,530	+				+2.5
3,471,530	+				-0.6
3,471,531	-				-0.1
3,471,531	-				+0.1
3,471,531	-				-0.1
3,471,531	-				-0.0
3,471,531	-				-0.8
3,471,531	-				+0.2
3,471,531	-				-0.2
3,471,531	-				+0.1
3,471,540	+				-0.0
3,471,554	+				+0.4
3,471,554	+				-0.1
3,471,555	-				+0.5
3,471,555	-				-0.2
3,471,555	-				+0.5
3,471,558	+				-0.1
3,471,559	-				-0.2
3,471,559	-				-0.3
3,471,600	+				+0.8
3,471,600	+				+1.3
3,471,682	-		ECD_03320	0.12	+0.1
3,471,685	+		ECD_03320	0.13	-0.5
3,471,686	-		ECD_03320	0.13	+1.5
3,471,686	-		ECD_03320	0.13	-0.1
3,471,810	+		ECD_03320	0.31	+0.4
3,471,850	+		ECD_03320	0.37	-0.2
3,471,851	-		ECD_03320	0.38	+0.7
3,471,851	-		ECD_03320	0.38	+0.6
3,471,871	+		ECD_03320	0.41	+0.3
3,471,871	+		ECD_03320	0.41	+0.7
3,471,871	+		ECD_03320	0.41	-0.3
3,471,872	-		ECD_03320	0.41	+0.6
3,471,872	-		ECD_03320	0.41	-0.0
3,471,872	-		ECD_03320	0.41	+0.6
3,471,872	-		ECD_03320	0.41	+0.7
3,471,872	-		ECD_03320	0.41	-0.3
3,471,872	-		ECD_03320	0.41	-1.0
3,471,872	-		ECD_03320	0.41	+0.3
3,471,872	-		ECD_03320	0.41	-0.5
3,471,872	-		ECD_03320	0.41	+0.6
3,471,872	-		ECD_03320	0.41	+0.5
3,471,874	-		ECD_03320	0.41	+0.2
3,471,955	+		ECD_03320	0.53	+0.5