Strain Fitness in Escherichia coli BL21 around ECD_03210

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,347,590	+		ECD_03209	0.57	-0.9
3,347,713	-		ECD_03209	0.63	+0.0
3,347,713	-		ECD_03209	0.63	+0.2
3,347,799	-		ECD_03209	0.67	+0.3
3,347,799	-		ECD_03209	0.67	-0.7
3,347,811	+		ECD_03209	0.67	+0.1
3,347,811	+		ECD_03209	0.67	-0.1
3,347,811	+		ECD_03209	0.67	+0.0
3,347,811	+		ECD_03209	0.67	+0.6
3,347,812	-		ECD_03209	0.68	+0.3
3,347,812	-		ECD_03209	0.68	-0.5
3,347,812	-		ECD_03209	0.68	+0.0
3,347,812	-		ECD_03209	0.68	+0.7
3,347,814	-		ECD_03209	0.68	+0.6
3,347,824	+		ECD_03209	0.68	+0.6
3,347,825	-		ECD_03209	0.68	+0.3
3,347,825	-		ECD_03209	0.68	-1.4
3,347,847	+		ECD_03209	0.69	+0.0
3,347,847	+		ECD_03209	0.69	-0.4
3,347,847	+		ECD_03209	0.69	+0.1
3,347,847	+		ECD_03209	0.69	+0.5
3,347,848	-		ECD_03209	0.69	-0.2
3,347,848	-		ECD_03209	0.69	-0.2
3,347,848	-		ECD_03209	0.69	+0.2
3,347,887	+		ECD_03209	0.71	+0.5
3,347,887	+		ECD_03209	0.71	-1.4
3,347,974	-		ECD_03209	0.75	-0.4
3,348,017	+		ECD_03209	0.77	-0.0
3,348,018	-		ECD_03209	0.77	+0.1
3,348,059	+		ECD_03209	0.79	-0.3
3,348,059	+		ECD_03209	0.79	+0.4
3,348,059	+		ECD_03209	0.79	+0.1
3,348,060	-		ECD_03209	0.79	+0.3
3,348,060	-		ECD_03209	0.79	-0.2
3,348,060	-		ECD_03209	0.79	+0.5
3,348,069	+		ECD_03209	0.80	-0.1
3,348,069	+		ECD_03209	0.80	+0.2
3,348,072	-		ECD_03209	0.80	-0.1
3,348,072	-		ECD_03209	0.80	+0.3
3,348,118	-		ECD_03209	0.82	-0.4
3,348,128	+		ECD_03209	0.83	-0.1
3,348,170	+		ECD_03209	0.85	+1.0
3,348,170	+		ECD_03209	0.85	-0.2
3,348,170	+		ECD_03209	0.85	+0.2
3,348,170	+		ECD_03209	0.85	+0.2
3,348,171	-		ECD_03209	0.85	-0.0
3,348,171	-		ECD_03209	0.85	-0.3
3,348,171	-		ECD_03209	0.85	+0.1
3,348,173	+		ECD_03209	0.85	-0.3
3,348,174	-		ECD_03209	0.85	-0.8
3,348,234	+		ECD_03209	0.88	-0.2
3,348,234	+		ECD_03209	0.88	+0.3
3,348,235	-		ECD_03209	0.88	-1.0
3,348,239	-		ECD_03209	0.88	-0.2
3,348,362	+				+0.2
3,348,379	+				-0.3
3,348,380	-				+0.0
3,348,493	-				-0.2
3,348,493	-				-0.5
3,348,502	+				+0.0
3,348,558	+				+0.5
3,348,559	-				+0.1
3,348,685	-		ECD_03210	0.10	-0.9
3,348,706	+		ECD_03210	0.12	-0.3
3,348,734	-		ECD_03210	0.14	-1.9
3,348,734	-		ECD_03210	0.14	-1.2
3,348,786	-		ECD_03210	0.18	-1.0
3,348,789	+		ECD_03210	0.19	-0.2
3,348,789	+		ECD_03210	0.19	-0.8
3,348,790	-		ECD_03210	0.19	-2.2
3,348,797	-		ECD_03210	0.19	-0.3
3,348,920	+		ECD_03210	0.29	-0.8
3,349,060	+		ECD_03210	0.41	-0.9
3,349,060	+		ECD_03210	0.41	-0.7
3,349,061	-		ECD_03210	0.41	-1.7
3,349,061	-		ECD_03210	0.41	-1.1
3,349,061	-		ECD_03210	0.41	-2.4
3,349,061	-		ECD_03210	0.41	-0.8
3,349,061	-		ECD_03210	0.41	-1.5
3,349,380	-		ECD_03210	0.67	-1.2
3,349,400	+		ECD_03210	0.69	-1.6
3,349,400	+		ECD_03210	0.69	-2.0
3,349,401	-		ECD_03210	0.69	-0.4
3,349,434	-		ECD_03210	0.71	-2.1
3,349,449	-		ECD_03210	0.73	-2.2
3,349,470	-		ECD_03210	0.74	-0.7
3,349,554	-		ECD_03210	0.81	-1.2
3,349,651	+		ECD_03210	0.89	-0.8
3,349,652	-		ECD_03210	0.89	-0.9
3,349,652	-		ECD_03210	0.89	-0.2
3,349,703	+				-2.2
3,349,704	-				-0.1
3,349,721	-				-1.9
3,349,721	-				-1.5
3,349,798	+				-1.0
3,349,798	+				-1.4
3,349,799	-				+0.2
3,349,799	-				+0.5
3,349,799	-				-0.1
3,349,799	-				-1.0
3,349,821	-				-0.1
3,349,834	-				+1.2
3,349,917	+				+0.4
3,350,021	-		ECD_03211	0.27	+0.4
3,350,052	-		ECD_03211	0.33	+0.1
3,350,064	+		ECD_03211	0.35	+0.6
3,350,103	+		ECD_03211	0.42	+0.1
3,350,103	+		ECD_03211	0.42	-0.2
3,350,268	+		ECD_03211	0.71	-0.1
3,350,269	-		ECD_03211	0.71	+0.3
3,350,269	-		ECD_03211	0.71	+0.4
3,350,409	-				+0.2
3,350,409	-				-0.2
3,350,409	-				+0.1
3,350,409	-				+0.4
3,350,412	+				+0.3
3,350,413	-				-0.0
3,350,413	-				-0.2
3,350,413	-				-0.6
3,350,416	+				+0.7
3,350,416	+				-0.2
3,350,416	+				+0.1
3,350,417	-				+0.3
3,350,417	-				+0.3
3,350,417	-				+0.5
3,350,418	+				+0.0
3,350,418	+				+0.1
3,350,419	-				-0.3
3,350,459	-				+0.4
3,350,463	+				+0.1
3,350,498	-				+0.1
3,350,498	-				+0.0
3,350,501	+				+0.0
3,350,502	-				-0.8
3,350,683	-		ECD_03212	0.37	+0.1
3,350,685	+		ECD_03212	0.37	-0.0