Strain Fitness in Escherichia coli BL21 around ECD_03081

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,229,212	+				-1.3
3,229,213	-				+0.0
3,229,213	-				-0.3
3,229,216	-				-0.1
3,229,254	+				+0.5
3,229,254	+				+0.3
3,229,284	+				+0.1
3,229,285	-				-0.2
3,229,286	+				+0.1
3,229,298	+				-0.2
3,229,356	+		ECD_03079	0.12	-1.5
3,229,395	+		ECD_03079	0.20	+0.3
3,229,395	+		ECD_03079	0.20	+1.4
3,229,395	+		ECD_03079	0.20	+0.1
3,229,395	+		ECD_03079	0.20	+0.1
3,229,423	+		ECD_03079	0.26	+0.0
3,229,423	+		ECD_03079	0.26	-0.5
3,229,423	+		ECD_03079	0.26	-0.5
3,229,424	-		ECD_03079	0.26	-0.5
3,229,527	-		ECD_03079	0.47	+1.9
3,229,531	+		ECD_03079	0.48	+0.6
3,229,532	-		ECD_03079	0.48	+0.1
3,229,532	-		ECD_03079	0.48	+0.5
3,229,532	-		ECD_03079	0.48	+0.3
3,229,532	-		ECD_03079	0.48	+0.4
3,229,532	-		ECD_03079	0.48	-0.1
3,229,750	+				+0.2
3,229,763	+				+0.1
3,229,764	-				-0.2
3,229,764	-				+1.5
3,229,802	+		ECD_03080	0.12	-0.1
3,229,802	+		ECD_03080	0.12	-0.1
3,229,821	+		ECD_03080	0.18	+0.2
3,229,822	-		ECD_03080	0.18	+0.3
3,229,822	-		ECD_03080	0.18	+0.0
3,229,999	+		ECD_03080	0.70	+0.3
3,230,006	-		ECD_03080	0.72	-0.1
3,230,006	-		ECD_03080	0.72	-0.3
3,230,006	-		ECD_03080	0.72	-0.6
3,230,053	+		ECD_03080	0.86	-0.2
3,230,053	+		ECD_03080	0.86	-0.2
3,230,053	+		ECD_03080	0.86	-0.1
3,230,055	+		ECD_03080	0.86	+0.2
3,230,057	+		ECD_03080	0.87	+0.1
3,230,057	+		ECD_03080	0.87	+0.4
3,230,057	+		ECD_03080	0.87	+0.2
3,230,057	+		ECD_03080	0.87	-0.5
3,230,057	+		ECD_03080	0.87	+0.7
3,230,057	+		ECD_03080	0.87	+0.4
3,230,058	-		ECD_03080	0.87	-0.1
3,230,058	-		ECD_03080	0.87	-0.3
3,230,058	-		ECD_03080	0.87	+0.5
3,230,063	-		ECD_03080	0.89	-0.9
3,230,075	-				-0.1
3,230,079	+				+0.1
3,230,087	+				+0.3
3,230,272	+		ECD_03081	0.20	-0.1
3,230,297	+		ECD_03081	0.26	-0.3
3,230,298	-		ECD_03081	0.26	-0.1
3,230,340	+		ECD_03081	0.35	+0.7
3,230,341	-		ECD_03081	0.35	+0.7
3,230,440	-		ECD_03081	0.57	-0.1
3,230,440	-		ECD_03081	0.57	-0.2
3,230,440	-		ECD_03081	0.57	+0.1
3,230,564	+		ECD_03081	0.83	-0.2
3,230,564	+		ECD_03081	0.83	-0.1
3,230,565	-		ECD_03081	0.83	-0.2
3,230,601	-				+0.4
3,230,601	-				-0.1
3,230,624	+				+0.0
3,230,624	+				+0.5
3,230,625	-				-0.9
3,230,625	-				-0.4
3,230,625	-				+0.5
3,230,678	-				+0.3
3,230,678	-				-0.0
3,230,711	-				-0.6
3,230,748	-		ECD_03082	0.13	-0.4
3,230,748	-		ECD_03082	0.13	+1.1
3,230,829	+		ECD_03082	0.22	-0.2
3,230,830	-		ECD_03082	0.22	+0.0
3,230,856	+		ECD_03082	0.25	+0.5
3,230,857	-		ECD_03082	0.25	+0.2
3,230,857	-		ECD_03082	0.25	-0.1
3,230,857	-		ECD_03082	0.25	+0.0
3,231,045	+		ECD_03082	0.46	+0.2
3,231,152	-		ECD_03082	0.59	+0.7
3,231,152	-		ECD_03082	0.59	-0.3
3,231,154	-		ECD_03082	0.59	+0.3
3,231,229	-		ECD_03082	0.67	+0.4
3,231,263	-		ECD_03082	0.71	+0.8
3,231,370	+		ECD_03082	0.84	-0.1
3,231,370	+		ECD_03082	0.84	+1.0
3,231,492	+				-0.2
3,231,513	+				-0.3
3,231,514	-				+0.2
3,231,514	-				-0.5
3,231,514	-				-0.0
3,231,514	-				-0.3
3,231,541	+				-1.1
3,231,542	-				+0.0
3,231,640	+		ECD_03083	0.19	+0.2
3,231,641	-		ECD_03083	0.19	-0.6