Strain Fitness in Escherichia coli BL21 around ECD_02962

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,110,648	-		ECD_02961	0.72	-0.2
3,110,740	-		ECD_02961	0.79	+0.4
3,110,843	-		ECD_02961	0.86	-0.7
3,110,843	-		ECD_02961	0.86	+0.3
3,110,863	-		ECD_02961	0.87	+0.7
3,111,008	+				+0.2
3,111,008	+				+0.1
3,111,008	+				+0.7
3,111,009	-				-0.6
3,111,009	-				+0.6
3,111,009	-				+0.2
3,111,067	+				+0.1
3,111,353	+				+0.2
3,111,388	+				-0.3
3,111,449	+				-0.2
3,111,453	+				-0.4
3,111,453	+				+0.3
3,111,453	+				+0.2
3,111,454	-				+0.4
3,111,454	-				-0.4
3,111,454	-				-0.1
3,111,500	-				+0.0
3,111,542	+				+0.1
3,111,552	+				-0.5
3,111,552	+				+0.3
3,111,642	-				+0.0
3,111,642	-				-0.2
3,111,661	+		ECD_02962	0.11	+0.2
3,111,662	-		ECD_02962	0.11	+0.8
3,111,667	+		ECD_02962	0.11	-0.1
3,111,667	+		ECD_02962	0.11	+0.0
3,111,667	+		ECD_02962	0.11	-0.1
3,111,667	+		ECD_02962	0.11	+0.1
3,111,667	+		ECD_02962	0.11	-0.6
3,111,667	+		ECD_02962	0.11	-0.6
3,111,668	-		ECD_02962	0.11	+0.1
3,111,668	-		ECD_02962	0.11	-0.1
3,111,668	-		ECD_02962	0.11	+0.5
3,111,683	-		ECD_02962	0.12	-0.6
3,111,696	+		ECD_02962	0.13	+0.4
3,111,696	+		ECD_02962	0.13	-0.9
3,111,696	+		ECD_02962	0.13	-0.5
3,111,696	+		ECD_02962	0.13	-0.2
3,111,696	+		ECD_02962	0.13	+0.1
3,111,697	-		ECD_02962	0.13	-0.1
3,111,721	+		ECD_02962	0.15	-0.2
3,111,721	+		ECD_02962	0.15	+0.0
3,111,721	+		ECD_02962	0.15	+0.7
3,111,725	+		ECD_02962	0.16	+0.0
3,111,725	+		ECD_02962	0.16	+0.6
3,111,725	+		ECD_02962	0.16	+0.1
3,111,725	+		ECD_02962	0.16	+0.6
3,111,726	-		ECD_02962	0.16	-0.8
3,111,726	-		ECD_02962	0.16	+2.4
3,111,726	-		ECD_02962	0.16	+1.2
3,111,735	-		ECD_02962	0.16	-0.3
3,111,735	-		ECD_02962	0.16	+0.8
3,111,735	-		ECD_02962	0.16	+0.2
3,111,770	+		ECD_02962	0.19	-0.3
3,111,771	-		ECD_02962	0.19	-0.3
3,111,810	+		ECD_02962	0.22	-0.3
3,111,934	+		ECD_02962	0.32	-0.4
3,111,944	+		ECD_02962	0.32	+0.1
3,111,945	-		ECD_02962	0.32	-0.6
3,111,999	-		ECD_02962	0.37	-0.8
3,112,023	+		ECD_02962	0.38	-0.3
3,112,023	+		ECD_02962	0.38	+0.4
3,112,024	-		ECD_02962	0.39	+0.1
3,112,024	-		ECD_02962	0.39	+1.3
3,112,024	-		ECD_02962	0.39	-0.8
3,112,047	+		ECD_02962	0.40	-0.1
3,112,047	+		ECD_02962	0.40	-0.3
3,112,076	-		ECD_02962	0.43	-0.2
3,112,123	+		ECD_02962	0.46	-0.2
3,112,124	-		ECD_02962	0.46	-0.2
3,112,124	-		ECD_02962	0.46	-0.6
3,112,124	-		ECD_02962	0.46	-0.5
3,112,125	+		ECD_02962	0.46	-0.3
3,112,125	+		ECD_02962	0.46	+0.1
3,112,125	+		ECD_02962	0.46	-0.7
3,112,125	+		ECD_02962	0.46	-0.3
3,112,126	-		ECD_02962	0.46	-0.7
3,112,126	-		ECD_02962	0.46	-0.1
3,112,128	+		ECD_02962	0.47	-0.6
3,112,128	+		ECD_02962	0.47	-0.7
3,112,128	+		ECD_02962	0.47	-0.3
3,112,128	+		ECD_02962	0.47	+0.5
3,112,128	+		ECD_02962	0.47	-0.5
3,112,129	-		ECD_02962	0.47	-0.4
3,112,129	-		ECD_02962	0.47	-0.2
3,112,129	-		ECD_02962	0.47	-0.3
3,112,255	-		ECD_02962	0.56	+0.7
3,112,362	+		ECD_02962	0.65	-0.4
3,112,428	+		ECD_02962	0.70	+0.1
3,112,473	+		ECD_02962	0.73	-0.2
3,112,499	-		ECD_02962	0.75	-0.1
3,112,510	-		ECD_02962	0.76	-0.1
3,112,644	+		ECD_02962	0.86	+0.5
3,112,644	+		ECD_02962	0.86	+0.3
3,112,644	+		ECD_02962	0.86	-0.6
3,112,644	+		ECD_02962	0.86	-0.8
3,112,644	+		ECD_02962	0.86	+0.0
3,112,644	+		ECD_02962	0.86	-0.5
3,112,645	-		ECD_02962	0.86	-0.1
3,112,798	-				+1.8
3,112,831	+				-0.0
3,112,911	+				-0.2
3,112,920	+				-0.6
3,112,923	-				-0.5
3,113,040	+		ECD_02963	0.11	+0.0
3,113,061	+		ECD_02963	0.14	-0.7
3,113,093	+		ECD_02963	0.18	+0.4
3,113,131	+		ECD_02963	0.23	-1.9
3,113,132	-		ECD_02963	0.23	+0.0
3,113,145	+		ECD_02963	0.25	-1.0
3,113,157	+		ECD_02963	0.27	-0.6
3,113,157	+		ECD_02963	0.27	+1.0
3,113,165	+		ECD_02963	0.28	-1.0
3,113,165	+		ECD_02963	0.28	-0.3
3,113,205	+		ECD_02963	0.33	+0.7
3,113,205	+		ECD_02963	0.33	-1.0
3,113,224	+		ECD_02963	0.35	-0.0
3,113,224	+		ECD_02963	0.35	-1.2
3,113,268	+		ECD_02963	0.41	+0.1
3,113,624	+		ECD_02963	0.87	-0.1
3,113,625	-		ECD_02963	0.87	-0.7
3,113,672	+				-0.7
3,113,703	+				+0.9
3,113,804	+				+0.3