Strain Fitness in Escherichia coli BL21 around ECD_02944

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,086,562	+		ECD_02942	0.71	-0.1
3,086,562	+		ECD_02942	0.71	-0.8
3,086,562	+		ECD_02942	0.71	-0.0
3,086,563	-		ECD_02942	0.72	-0.2
3,086,668	-		ECD_02942	0.79	+0.2
3,086,781	+		ECD_02942	0.87	+0.6
3,086,937	-				-0.2
3,086,937	-				+0.3
3,087,132	+		ECD_02943	0.41	-1.0
3,087,133	-		ECD_02943	0.41	-0.0
3,087,133	-		ECD_02943	0.41	-1.8
3,087,175	+		ECD_02943	0.53	+0.0
3,087,228	+		ECD_02943	0.69	-0.8
3,087,229	-		ECD_02943	0.70	-0.9
3,087,236	-		ECD_02943	0.72	+0.1
3,087,314	-				-0.2
3,087,508	-				-0.2
3,087,559	-				-0.2
3,087,600	+				-2.0
3,087,601	-				-0.1
3,087,612	+				-0.8
3,087,612	+				-1.2
3,087,612	+				-0.8
3,087,613	-				-0.5
3,087,739	+		ECD_02944	0.19	-0.4
3,087,739	+		ECD_02944	0.19	-0.1
3,087,740	-		ECD_02944	0.20	-0.7
3,087,740	-		ECD_02944	0.20	-0.1
3,087,749	-		ECD_02944	0.20	-1.0
3,087,752	+		ECD_02944	0.21	-0.4
3,087,752	+		ECD_02944	0.21	-0.4
3,087,752	+		ECD_02944	0.21	+0.4
3,087,752	+		ECD_02944	0.21	-0.6
3,087,752	+		ECD_02944	0.21	+0.1
3,087,752	+		ECD_02944	0.21	-0.8
3,087,752	+		ECD_02944	0.21	-0.8
3,087,752	+		ECD_02944	0.21	-0.4
3,087,753	-		ECD_02944	0.21	-1.0
3,087,753	-		ECD_02944	0.21	-0.4
3,087,759	-		ECD_02944	0.21	-1.8
3,087,788	+		ECD_02944	0.24	-0.6
3,087,789	-		ECD_02944	0.24	-1.2
3,087,792	-		ECD_02944	0.25	-0.4
3,087,873	+		ECD_02944	0.33	+0.0
3,087,883	+		ECD_02944	0.34	-0.4
3,087,903	+		ECD_02944	0.36	+0.2
3,087,903	+		ECD_02944	0.36	-1.8
3,087,903	+		ECD_02944	0.36	-0.9
3,087,961	+		ECD_02944	0.42	+0.0
3,087,961	+		ECD_02944	0.42	-0.4
3,087,962	-		ECD_02944	0.42	+0.3
3,087,962	-		ECD_02944	0.42	-0.4
3,087,962	-		ECD_02944	0.42	-0.2
3,087,962	-		ECD_02944	0.42	-0.6
3,088,052	+		ECD_02944	0.51	-0.8
3,088,052	+		ECD_02944	0.51	-0.7
3,088,052	+		ECD_02944	0.51	-0.5
3,088,053	-		ECD_02944	0.51	-0.3
3,088,053	-		ECD_02944	0.51	-1.5
3,088,053	-		ECD_02944	0.51	-0.5
3,088,053	-		ECD_02944	0.51	-1.1
3,088,053	-		ECD_02944	0.51	-0.6
3,088,055	-		ECD_02944	0.52	-1.3
3,088,076	-		ECD_02944	0.54	-0.2
3,088,165	-		ECD_02944	0.63	+0.3
3,088,211	+		ECD_02944	0.67	-0.1
3,088,486	-				-0.6
3,088,486	-				-0.6
3,088,669	+				-0.3
3,088,669	+				+0.5
3,088,669	+				-2.8
3,088,808	-				+0.4
3,088,915	-				-0.0
3,088,934	-				+0.5
3,088,934	-				-0.1
3,088,934	-				+1.2
3,088,936	+				+0.7
3,088,982	+				-0.7
3,088,984	+				-0.5
3,088,985	-				-0.4
3,089,060	-		ECD_02945	0.11	-0.1
3,089,138	+		ECD_02945	0.14	-1.2
3,089,138	+		ECD_02945	0.14	-0.3
3,089,139	-		ECD_02945	0.14	-0.5
3,089,139	-		ECD_02945	0.14	-0.4
3,089,139	-		ECD_02945	0.14	+0.0
3,089,153	+		ECD_02945	0.14	+0.0
3,089,153	+		ECD_02945	0.14	-0.0
3,089,153	+		ECD_02945	0.14	+0.5
3,089,154	-		ECD_02945	0.14	-0.9
3,089,264	-		ECD_02945	0.18	+1.3
3,089,264	-		ECD_02945	0.18	-0.2
3,089,267	+		ECD_02945	0.18	-0.6
3,089,267	+		ECD_02945	0.18	-0.4
3,089,268	-		ECD_02945	0.18	+0.6
3,089,268	-		ECD_02945	0.18	-0.3
3,089,284	+		ECD_02945	0.18	+0.1
3,089,284	+		ECD_02945	0.18	-0.3
3,089,284	+		ECD_02945	0.18	+0.7
3,089,284	+		ECD_02945	0.18	+0.3
3,089,285	-		ECD_02945	0.18	+0.4
3,089,285	-		ECD_02945	0.18	+0.3
3,089,345	-		ECD_02945	0.20	+0.4
3,089,365	+		ECD_02945	0.21	+0.8
3,089,384	+		ECD_02945	0.22	+0.0
3,089,385	-		ECD_02945	0.22	+0.8
3,089,385	-		ECD_02945	0.22	+0.9
3,089,460	-		ECD_02945	0.24	-1.2
3,089,462	-		ECD_02945	0.24	-0.4