Strain Fitness in Escherichia coli BL21 around ECD_01830
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
1,888,325 | + | -0.2 | |||
1,888,489 | + | ECD_01829 | 0.14 | +0.3 | |
1,888,511 | + | ECD_01829 | 0.17 | -0.6 | |
1,888,600 | + | ECD_01829 | 0.28 | +1.2 | |
1,888,862 | - | ECD_01829 | 0.63 | +0.3 | |
1,888,863 | + | ECD_01829 | 0.63 | -0.3 | |
1,888,863 | + | ECD_01829 | 0.63 | +0.5 | |
1,888,864 | - | ECD_01829 | 0.63 | -1.2 | |
1,889,214 | + | +0.5 | |||
1,889,265 | + | ECD_01830 | 0.16 | -0.3 | |
1,889,309 | + | ECD_01830 | 0.22 | -0.9 | |
1,889,455 | + | ECD_01830 | 0.40 | -1.6 | |
1,889,713 | + | ECD_01830 | 0.73 | -0.5 | |
1,889,890 | + | -0.2 | |||
1,890,002 | + | -0.4 | |||
1,890,071 | + | +0.4 | |||
1,890,126 | - | +0.2 | |||
1,890,169 | - | +0.3 |
Or see this region's nucleotide sequence