Strain Fitness in Escherichia coli BL21 around ECD_01821
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
|---|---|---|---|---|---|
| remove | |||||
| 1,876,860 | - | ECD_01820 | 0.22 | -0.9 | |
| 1,877,515 | + | ECD_01820 | 0.77 | -0.5 | |
| 1,877,858 | - | +0.0 | |||
| 1,877,992 | - | ECD_01821 | 0.24 | -0.6 | |
| 1,878,149 | - | ECD_01821 | 0.48 | -0.9 | |
| 1,878,741 | - | ECD_01822 | 0.12 | -0.4 | |
| 1,878,763 | - | ECD_01822 | 0.14 | +0.5 | |
| 1,878,865 | - | ECD_01822 | 0.19 | +0.6 | |
| 1,878,958 | - | ECD_01822 | 0.24 | +0.8 | |
| 1,879,165 | - | ECD_01822 | 0.36 | -0.1 | |
| 1,879,339 | + | ECD_01822 | 0.45 | +0.3 |
Or see this region's nucleotide sequence