Strain Fitness in Escherichia coli BL21 around ECD_01288
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
1,359,067 | + | ECD_01287 | 0.61 | +0.4 | |
1,359,076 | + | ECD_01287 | 0.62 | -1.9 | |
1,359,077 | - | ECD_01287 | 0.62 | +0.7 | |
1,359,157 | + | ECD_01287 | 0.68 | +0.6 | |
1,359,483 | + | -0.5 | |||
1,359,516 | + | -1.0 | |||
1,359,765 | + | ECD_01288 | 0.20 | +1.0 | |
1,359,766 | - | ECD_01288 | 0.20 | -0.7 | |
1,359,766 | - | ECD_01288 | 0.20 | +0.8 | |
1,360,032 | + | ECD_01288 | 0.50 | +0.8 | |
1,360,284 | + | ECD_01288 | 0.79 | +0.1 | |
1,360,336 | + | ECD_01288 | 0.85 | +0.2 | |
1,360,412 | + | +0.4 | |||
1,360,808 | - | ECD_01289 | 0.42 | -0.8 | |
1,360,809 | + | ECD_01289 | 0.42 | +0.2 | |
1,360,810 | - | ECD_01289 | 0.42 | +0.4 | |
1,361,179 | + | ECD_01289 | 0.86 | +0.0 | |
1,361,239 | + | -0.2 | |||
1,361,314 | + | -0.3 |
Or see this region's nucleotide sequence