Strain Fitness in Escherichia coli BL21 around ECD_01181
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
1,246,755 | - | +1.7 | |||
1,246,802 | + | +0.7 | |||
1,246,855 | + | +0.2 | |||
1,246,876 | + | +0.4 | |||
1,246,887 | + | -0.7 | |||
1,246,938 | + | +1.1 | |||
1,247,046 | + | ECD_01180 | 0.38 | +0.0 | |
1,247,211 | + | -0.8 | |||
1,247,274 | - | -0.6 | |||
1,247,594 | - | ECD_01181 | 0.19 | -0.0 | |
1,247,619 | + | ECD_01181 | 0.21 | -0.5 | |
1,247,620 | - | ECD_01181 | 0.21 | -0.8 | |
1,248,045 | + | ECD_01181 | 0.46 | -1.0 | |
1,248,370 | - | ECD_01181 | 0.65 | +0.0 | |
1,248,453 | - | ECD_01181 | 0.70 | +0.9 | |
1,248,564 | - | ECD_01181 | 0.77 | +0.1 | |
1,248,765 | - | ECD_01181 | 0.89 | +0.3 | |
1,248,828 | + | -1.3 | |||
1,249,010 | + | +0.0 | |||
1,249,018 | - | +0.4 |
Or see this region's nucleotide sequence