Strain Fitness in Escherichia coli BL21 around ECD_04101

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,366,404	+		ECD_04100	0.18	-0.7
4,366,449	+		ECD_04100	0.22	+0.6
4,366,456	-		ECD_04100	0.23	-0.1
4,366,460	-		ECD_04100	0.23	-0.1
4,366,510	-		ECD_04100	0.28	+0.6
4,366,519	+		ECD_04100	0.29	+0.2
4,366,562	-		ECD_04100	0.34	+0.7
4,366,591	+		ECD_04100	0.37	-0.6
4,366,591	+		ECD_04100	0.37	-0.4
4,366,597	-		ECD_04100	0.37	+0.1
4,366,687	-		ECD_04100	0.46	+0.2
4,366,690	+		ECD_04100	0.46	-0.1
4,366,719	+		ECD_04100	0.49	-0.5
4,366,732	+		ECD_04100	0.51	-0.2
4,366,743	+		ECD_04100	0.52	-0.4
4,366,745	+		ECD_04100	0.52	-0.2
4,366,834	-		ECD_04100	0.61	+0.4
4,366,834	-		ECD_04100	0.61	-0.4
4,367,084	-		ECD_04100	0.86	-0.5
4,367,279	+				-1.2
4,367,279	+				-1.0
4,367,358	+				+0.2
4,367,358	+				+0.1
4,367,358	+				+0.8
4,367,358	+				-0.2
4,367,358	+				-0.5
4,367,359	-				-0.6
4,367,399	+				-0.3
4,367,399	+				+0.2
4,367,399	+				-0.5
4,367,399	+				-0.0
4,367,400	-				-0.2
4,367,412	-				-0.1
4,367,467	+				-0.8
4,367,479	+				-0.7
4,367,521	+				-0.5
4,367,521	+				-0.1
4,367,522	-				+0.5
4,367,661	+		ECD_04101	0.19	-0.3
4,367,661	+		ECD_04101	0.19	+3.1
4,367,661	+		ECD_04101	0.19	-0.3
4,367,662	-		ECD_04101	0.19	+0.1
4,367,662	-		ECD_04101	0.19	+0.3
4,367,663	+		ECD_04101	0.19	+0.2
4,367,663	+		ECD_04101	0.19	+0.1
4,367,663	+		ECD_04101	0.19	-1.1
4,367,663	+		ECD_04101	0.19	-0.6
4,367,663	+		ECD_04101	0.19	-0.1
4,367,664	-		ECD_04101	0.19	-1.2
4,367,664	-		ECD_04101	0.19	+0.3
4,367,883	+		ECD_04101	0.35	+0.2
4,367,884	-		ECD_04101	0.35	+0.1
4,368,026	+		ECD_04101	0.46	-0.3
4,368,027	-		ECD_04101	0.46	+0.1
4,368,047	+		ECD_04101	0.47	+0.6
4,368,050	+		ECD_04101	0.47	-0.2
4,368,236	+		ECD_04101	0.61	-0.2
4,368,236	+		ECD_04101	0.61	-1.2
4,368,236	+		ECD_04101	0.61	-0.4
4,368,236	+		ECD_04101	0.61	+0.1
4,368,240	-		ECD_04101	0.61	+0.1
4,368,240	-		ECD_04101	0.61	-0.4
4,368,240	-		ECD_04101	0.61	-0.6
4,368,326	+		ECD_04101	0.67	-0.0
4,368,376	+		ECD_04101	0.71	-0.7
4,368,376	+		ECD_04101	0.71	+0.3
4,368,377	-		ECD_04101	0.71	+0.5
4,368,378	+		ECD_04101	0.71	-0.3
4,368,379	-		ECD_04101	0.71	-0.4
4,368,533	-		ECD_04101	0.82	+0.8
4,368,653	+				+0.9
4,368,654	-				-1.2
4,368,686	+				+0.5
4,368,686	+				+0.1
4,368,792	+				+0.6
4,368,792	+				+0.4
4,368,792	+				+0.0
4,368,792	+				+0.2
4,368,792	+				-0.4
4,368,793	-				+0.6
4,368,793	-				+0.2
4,368,793	-				-0.7
4,368,872	+				-0.5
4,368,873	-				+1.1
4,368,873	-				-1.2
4,368,882	-				+0.2
4,368,908	+				-0.3
4,368,909	-				-0.4
4,368,994	+		ECD_04102	0.12	+0.6
4,369,034	-		ECD_04102	0.19	+0.2
4,369,132	+		ECD_04102	0.37	+0.3
4,369,133	+		ECD_04102	0.37	-0.5
4,369,133	-		ECD_04102	0.37	+0.3
4,369,261	+		ECD_04102	0.60	-0.8
4,369,262	-		ECD_04102	0.60	+0.2
4,369,262	-		ECD_04102	0.60	-0.7
4,369,262	-		ECD_04102	0.60	-0.4
4,369,262	-		ECD_04102	0.60	-0.3
4,369,262	-		ECD_04102	0.60	-0.2
4,369,264	+		ECD_04102	0.61	-0.1
4,369,315	+		ECD_04102	0.70	+0.2
4,369,474	+				-0.4
4,369,475	-				+0.5
4,369,475	-				+0.3
4,369,475	-				-0.3
4,369,512	+				-0.1
4,369,519	+				+0.2
4,369,570	-				+0.1
4,369,575	-				-0.2
4,369,575	-				+0.1
4,369,718	-		ECD_04103	0.11	-1.2