Strain Fitness in Escherichia coli BL21 around ECD_03827

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,040,176	+		ECD_03826	0.74	+0.4
4,040,176	+		ECD_03826	0.74	-0.4
4,040,176	+		ECD_03826	0.74	+0.1
4,040,177	-		ECD_03826	0.74	+0.3
4,040,247	+		ECD_03826	0.77	+0.5
4,040,248	-		ECD_03826	0.77	-1.3
4,040,248	-		ECD_03826	0.77	+0.5
4,040,248	-		ECD_03826	0.77	-0.3
4,040,437	+		ECD_03826	0.84	+0.3
4,040,437	+		ECD_03826	0.84	+0.2
4,040,437	+		ECD_03826	0.84	+0.0
4,040,459	+		ECD_03826	0.85	-0.2
4,040,460	-		ECD_03826	0.85	-0.9
4,040,460	-		ECD_03826	0.85	+0.0
4,040,630	+				+0.5
4,040,631	-				+0.6
4,040,839	+				+0.0
4,040,937	+				-0.2
4,040,938	-				+0.2
4,040,941	+				+0.3
4,040,941	+				+0.1
4,040,941	+				+0.0
4,040,949	+				-0.2
4,040,950	-				-0.2
4,040,950	-				+0.4
4,040,955	-				+1.0
4,040,957	-				-0.3
4,041,133	+				-1.3
4,041,133	+				+0.0
4,041,133	+				-0.5
4,041,133	+				+0.1
4,041,133	+				-0.2
4,041,133	+				-0.6
4,041,133	+				-0.5
4,041,133	+				-0.6
4,041,134	-				-1.2
4,041,134	-				-3.2
4,041,134	-				-1.7
4,041,134	-				-1.4
4,041,134	-				-2.5
4,041,134	-				-0.6
4,041,134	-				-3.8
4,041,134	-				-2.6
4,041,134	-				+0.4
4,041,134	-				-2.4
4,041,135	+				+0.1
4,041,135	+				-0.7
4,041,135	+				+0.1
4,041,135	+				-0.2
4,041,135	+				-1.0
4,041,135	+				-0.0
4,041,136	-				-1.1
4,041,136	-				-1.7
4,041,136	-				-0.5
4,041,139	+				+0.1
4,041,139	+				-0.6
4,041,140	-				-2.8
4,041,140	-				-2.0
4,041,140	-				-2.3
4,041,157	+				-1.4
4,041,157	+				-1.7
4,041,157	+				-2.8
4,041,157	+				-2.5
4,041,162	+				-1.6
4,041,163	-				-2.1
4,041,163	-				-3.5
4,041,307	-		ECD_03827	0.16	-1.1
4,041,307	-		ECD_03827	0.16	-3.0
4,041,340	+		ECD_03827	0.20	-1.6
4,041,340	+		ECD_03827	0.20	-1.1
4,041,341	-		ECD_03827	0.20	-1.9
4,041,341	-		ECD_03827	0.20	-0.9
4,041,381	+		ECD_03827	0.24	-0.9
4,041,384	+		ECD_03827	0.25	-0.2
4,041,429	+		ECD_03827	0.30	-1.6
4,041,429	+		ECD_03827	0.30	-1.7
4,041,429	+		ECD_03827	0.30	-2.9
4,041,429	+		ECD_03827	0.30	-1.5
4,041,430	-		ECD_03827	0.30	-0.7
4,041,430	-		ECD_03827	0.30	-2.4
4,041,430	-		ECD_03827	0.30	-2.0
4,041,492	+		ECD_03827	0.37	-1.6
4,041,540	+		ECD_03827	0.42	-1.8
4,041,553	+		ECD_03827	0.44	-1.9
4,041,553	+		ECD_03827	0.44	-1.8
4,041,578	+		ECD_03827	0.47	-2.4
4,041,578	+		ECD_03827	0.47	-1.6
4,041,807	+		ECD_03827	0.72	-1.6
4,041,807	+		ECD_03827	0.72	-2.0
4,041,852	+		ECD_03827	0.77	-1.3
4,041,852	+		ECD_03827	0.77	-2.5
4,041,927	+		ECD_03827	0.86	-2.5
4,041,939	+		ECD_03827	0.87	-2.0
4,041,940	-		ECD_03827	0.87	-1.1
4,041,985	+				-1.5
4,041,986	-				-0.5
4,041,986	-				-0.8
4,041,986	-				-2.1
4,042,051	+				+0.3
4,042,051	+				-0.9
4,042,051	+				+0.1
4,042,051	+				-0.2
4,042,051	+				+0.0
4,042,052	-				-0.6
4,042,055	+				-0.2
4,042,055	+				+0.3
4,042,056	-				+0.6
4,042,056	-				+0.4
4,042,140	-				-1.3
4,042,170	-				+0.5
4,042,170	-				+0.4
4,042,189	-				+0.7
4,042,262	+				-0.4
4,042,282	+				-0.3
4,042,282	+				-0.2
4,042,283	-				-0.9
4,042,283	-				+0.8
4,042,287	-				+0.3
4,042,287	-				-0.1
4,042,323	+				+0.2
4,042,325	+				-0.0
4,042,326	-				+0.1
4,042,336	+				+0.4
4,042,346	+				+0.3
4,042,365	+				+0.8
4,042,519	-				-0.1
4,042,532	-				+0.1
4,042,596	-				-0.0
4,042,667	+		ECD_03828	0.13	+0.7
4,042,791	+		ECD_03828	0.19	-0.5
4,042,792	-		ECD_03828	0.19	-0.9
4,042,792	-		ECD_03828	0.19	-0.2
4,042,792	-		ECD_03828	0.19	-0.2
4,042,792	-		ECD_03828	0.19	-0.5
4,042,792	-		ECD_03828	0.19	-0.9
4,042,792	-		ECD_03828	0.19	-0.5
4,042,792	-		ECD_03828	0.19	+0.1
4,042,838	+		ECD_03828	0.21	-0.5
4,042,838	+		ECD_03828	0.21	-0.4
4,042,839	-		ECD_03828	0.21	-0.3
4,042,870	+		ECD_03828	0.22	+0.3
4,042,912	+		ECD_03828	0.24	-0.5
4,042,912	+		ECD_03828	0.24	-0.4