Strain Fitness in Escherichia coli BL21 around ECD_03649

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,842,720	-				-1.8
3,842,721	+				+0.6
3,842,747	+				+0.4
3,842,852	+		ECD_03648	0.14	-0.9
3,842,896	+		ECD_03648	0.18	-2.2
3,842,897	-		ECD_03648	0.18	-1.7
3,842,897	-		ECD_03648	0.18	-1.8
3,842,897	-		ECD_03648	0.18	-1.0
3,842,927	+		ECD_03648	0.22	-2.4
3,843,011	+		ECD_03648	0.31	-1.1
3,843,011	+		ECD_03648	0.31	-1.6
3,843,011	+		ECD_03648	0.31	-1.9
3,843,011	+		ECD_03648	0.31	-0.4
3,843,012	-		ECD_03648	0.31	-0.7
3,843,012	-		ECD_03648	0.31	-2.4
3,843,054	+		ECD_03648	0.35	-0.7
3,843,113	+		ECD_03648	0.42	-2.0
3,843,113	+		ECD_03648	0.42	-1.5
3,843,114	-		ECD_03648	0.42	-1.0
3,843,114	-		ECD_03648	0.42	-0.7
3,843,214	+		ECD_03648	0.52	-1.1
3,843,214	+		ECD_03648	0.52	-2.2
3,843,214	+		ECD_03648	0.52	-1.6
3,843,214	+		ECD_03648	0.52	-1.2
3,843,215	-		ECD_03648	0.53	-1.3
3,843,218	+		ECD_03648	0.53	-0.6
3,843,218	+		ECD_03648	0.53	-1.2
3,843,218	+		ECD_03648	0.53	-0.1
3,843,218	+		ECD_03648	0.53	-1.2
3,843,218	+		ECD_03648	0.53	-2.3
3,843,218	+		ECD_03648	0.53	-1.0
3,843,219	-		ECD_03648	0.53	-1.9
3,843,219	-		ECD_03648	0.53	-1.9
3,843,296	+		ECD_03648	0.61	-0.9
3,843,296	+		ECD_03648	0.61	-0.8
3,843,297	-		ECD_03648	0.61	-0.5
3,843,298	+		ECD_03648	0.62	-0.5
3,843,298	+		ECD_03648	0.62	-0.9
3,843,299	-		ECD_03648	0.62	-2.1
3,843,299	-		ECD_03648	0.62	-0.8
3,843,299	-		ECD_03648	0.62	-1.5
3,843,385	+		ECD_03648	0.71	-2.2
3,843,386	-		ECD_03648	0.71	-2.1
3,843,487	+		ECD_03648	0.82	-1.1
3,843,528	+		ECD_03648	0.86	-2.0
3,843,528	+		ECD_03648	0.86	-1.7
3,843,528	+		ECD_03648	0.86	-1.1
3,843,528	+		ECD_03648	0.86	-1.9
3,843,528	+		ECD_03648	0.86	-1.0
3,843,528	+		ECD_03648	0.86	-1.6
3,843,528	+		ECD_03648	0.86	-3.5
3,843,529	-		ECD_03648	0.86	-0.7
3,843,529	-		ECD_03648	0.86	-1.3
3,843,529	-		ECD_03648	0.86	-1.7
3,843,529	-		ECD_03648	0.86	-1.0
3,843,529	-		ECD_03648	0.86	-1.5
3,843,536	-		ECD_03648	0.87	-1.5
3,843,636	+				+0.3
3,843,646	+				-0.0
3,843,647	-				-0.9
3,843,653	+				+0.1
3,843,690	+				-0.5
3,843,690	+				+0.2
3,843,691	-				-1.5
3,843,714	+				-1.7
3,843,714	+				-0.8
3,843,714	+				-0.2
3,843,714	+				-1.2
3,843,715	-				-0.3
3,843,715	-				+0.3
3,843,715	-				-2.0
3,843,715	-				-1.8
3,843,719	+				-0.3
3,843,719	+				-0.2
3,843,719	+				-1.5
3,843,725	+				-2.1
3,843,725	+				-0.4
3,843,726	-				-2.1
3,843,726	-				-1.9
3,843,726	-				-0.6
3,843,729	+				-1.2
3,843,758	+				-1.2
3,843,759	-				-0.1
3,843,993	+		ECD_03649	0.15	-1.4
3,843,994	-		ECD_03649	0.15	-1.1
3,843,994	-		ECD_03649	0.15	-1.4
3,843,994	-		ECD_03649	0.15	-0.7
3,844,035	+		ECD_03649	0.17	-1.7
3,844,036	-		ECD_03649	0.17	-1.4
3,844,036	-		ECD_03649	0.17	-1.2
3,844,036	-		ECD_03649	0.17	-1.4
3,844,037	+		ECD_03649	0.17	-1.4
3,844,037	+		ECD_03649	0.17	-2.2
3,844,037	+		ECD_03649	0.17	-1.4
3,844,037	+		ECD_03649	0.17	-2.1
3,844,038	-		ECD_03649	0.17	-1.1
3,844,038	-		ECD_03649	0.17	-1.2
3,844,038	-		ECD_03649	0.17	-0.7
3,844,038	-		ECD_03649	0.17	-2.0
3,844,038	-		ECD_03649	0.17	-2.2
3,844,073	+		ECD_03649	0.19	-1.8
3,844,127	-		ECD_03649	0.22	+2.6
3,844,130	+		ECD_03649	0.22	-1.3
3,844,131	-		ECD_03649	0.22	-1.3
3,844,403	+		ECD_03649	0.37	-1.0
3,844,419	-		ECD_03649	0.38	-0.9
3,844,458	+		ECD_03649	0.40	-1.7
3,844,459	-		ECD_03649	0.40	-0.8
3,844,459	-		ECD_03649	0.40	-2.5
3,844,556	+		ECD_03649	0.45	+0.1
3,844,556	+		ECD_03649	0.45	-1.6
3,844,564	+		ECD_03649	0.46	-1.4
3,844,564	+		ECD_03649	0.46	-1.6
3,844,565	-		ECD_03649	0.46	-2.7
3,844,626	-		ECD_03649	0.49	-0.7
3,844,655	+		ECD_03649	0.51	-2.0
3,844,680	+		ECD_03649	0.52	-0.7
3,844,680	+		ECD_03649	0.52	-1.7
3,844,681	-		ECD_03649	0.52	-0.7
3,844,681	-		ECD_03649	0.52	-1.2
3,844,681	-		ECD_03649	0.52	-1.3
3,844,775	-		ECD_03649	0.57	-1.9
3,844,775	-		ECD_03649	0.57	-0.7
3,844,775	-		ECD_03649	0.57	-0.3
3,844,809	+		ECD_03649	0.59	-1.3
3,844,810	-		ECD_03649	0.59	-0.6
3,844,810	-		ECD_03649	0.59	-1.8
3,844,817	+		ECD_03649	0.59	-2.5
3,844,965	+		ECD_03649	0.67	-1.2
3,844,966	-		ECD_03649	0.67	-2.7
3,844,966	-		ECD_03649	0.67	-1.5
3,844,966	-		ECD_03649	0.67	-1.5
3,844,995	+		ECD_03649	0.69	-2.4
3,844,996	-		ECD_03649	0.69	-1.6
3,845,000	+		ECD_03649	0.69	-2.1
3,845,000	+		ECD_03649	0.69	-1.1
3,845,001	-		ECD_03649	0.69	+0.7
3,845,001	-		ECD_03649	0.69	-0.1
3,845,146	+		ECD_03649	0.77	-1.1
3,845,146	+		ECD_03649	0.77	-1.3
3,845,158	-		ECD_03649	0.78	-0.5
3,845,357	+		ECD_03649	0.88	-1.6
3,845,358	-		ECD_03649	0.88	-1.9
3,845,358	-		ECD_03649	0.88	-0.3
3,845,384	+		ECD_03649	0.90	-1.7
3,845,392	+				-0.9
3,845,398	+				-0.9
3,845,398	+				-2.9
3,845,399	-				-1.1
3,845,618	+				-1.6
3,845,618	+				-0.8
3,845,619	-				-2.0
3,845,622	+				-2.0
3,845,622	+				-1.5
3,845,623	-				-2.3
3,845,649	-				-1.3
3,845,772	-		ECD_03650	0.13	-1.0
3,846,276	+		ECD_03650	0.46	-0.9
3,846,303	+		ECD_03650	0.47	-0.1
3,846,334	-		ECD_03650	0.49	-0.7
3,846,344	+		ECD_03650	0.50	-1.1
3,846,403	-		ECD_03650	0.54	-1.7
3,846,468	-		ECD_03650	0.58	-1.4
3,846,508	+		ECD_03650	0.61	-2.0
3,846,508	+		ECD_03650	0.61	-1.3