Strain Fitness in Escherichia coli BL21 around ECD_03610
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
3,796,418 | - | +0.6 | |||
3,797,216 | - | +0.0 | |||
3,797,417 | - | +0.6 | |||
3,797,427 | - | -0.2 | |||
3,797,480 | - | ECD_03610 | 0.14 | +0.4 | |
3,797,680 | - | ECD_03610 | 0.37 | -0.8 | |
3,797,923 | - | ECD_03610 | 0.64 | -1.1 | |
3,798,065 | - | ECD_03610 | 0.80 | -0.9 | |
3,798,065 | - | ECD_03610 | 0.80 | -0.0 | |
3,798,310 | - | -0.2 | |||
3,798,403 | - | ECD_03611 | 0.17 | +0.5 | |
3,798,403 | - | ECD_03611 | 0.17 | -1.9 | |
3,798,420 | - | ECD_03611 | 0.19 | +0.4 | |
3,798,420 | - | ECD_03611 | 0.19 | -0.8 | |
3,798,420 | - | ECD_03611 | 0.19 | +0.1 | |
3,798,420 | - | ECD_03611 | 0.19 | +0.1 | |
3,798,444 | - | ECD_03611 | 0.21 | +1.3 | |
3,798,444 | - | ECD_03611 | 0.21 | -0.3 | |
3,798,444 | - | ECD_03611 | 0.21 | +0.2 | |
3,798,559 | - | ECD_03611 | 0.33 | -0.4 | |
3,798,754 | - | ECD_03611 | 0.53 | -0.4 | |
3,799,227 | - | +0.8 |
Or see this region's nucleotide sequence