Strain Fitness in Escherichia coli BL21 around ECD_03606

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,791,572	-		ECD_03605	0.33	-0.6
3,791,607	-		ECD_03605	0.36	+0.5
3,791,629	+		ECD_03605	0.37	+0.2
3,791,679	+		ECD_03605	0.41	+0.5
3,791,706	+		ECD_03605	0.43	+0.1
3,791,706	+		ECD_03605	0.43	-0.4
3,791,706	+		ECD_03605	0.43	+0.2
3,791,785	-		ECD_03605	0.48	-0.1
3,791,832	+		ECD_03605	0.52	+0.1
3,791,862	+		ECD_03605	0.54	+1.2
3,791,863	-		ECD_03605	0.54	-0.1
3,791,874	+		ECD_03605	0.55	-0.1
3,791,874	+		ECD_03605	0.55	+0.5
3,791,874	+		ECD_03605	0.55	-1.4
3,791,983	-		ECD_03605	0.63	+1.2
3,792,007	+		ECD_03605	0.64	+0.6
3,792,014	-		ECD_03605	0.65	+0.4
3,792,018	+		ECD_03605	0.65	+0.4
3,792,018	+		ECD_03605	0.65	-0.5
3,792,019	-		ECD_03605	0.65	+0.4
3,792,019	-		ECD_03605	0.65	-1.4
3,792,019	-		ECD_03605	0.65	+0.9
3,792,033	+		ECD_03605	0.66	-0.7
3,792,050	+		ECD_03605	0.67	+0.2
3,792,140	-		ECD_03605	0.74	+1.3
3,792,345	+		ECD_03605	0.89	+2.3
3,792,346	-		ECD_03605	0.89	+0.3
3,792,346	-		ECD_03605	0.89	+0.4
3,792,400	+				-1.0
3,792,414	+				-0.0
3,792,415	-				-0.4
3,792,504	+				-0.0
3,792,504	+				+0.4
3,792,519	-				-0.0
3,792,560	-				-0.1
3,792,560	-				+0.1
3,792,583	+				-0.6
3,792,584	-				+0.6
3,792,584	-				-0.1
3,792,584	-				+0.2
3,792,584	-				-0.1
3,792,584	-				+1.6
3,792,584	-				+0.2
3,792,584	-				+0.2
3,792,592	-				-0.0
3,792,604	-				+0.2
3,792,614	-				-0.2
3,792,614	-				+0.2
3,792,614	-				+0.6
3,792,617	-				-0.2
3,792,688	-				+0.1
3,792,808	+		ECD_03606	0.15	+0.6
3,792,808	+		ECD_03606	0.15	-0.0
3,792,809	-		ECD_03606	0.15	+1.2
3,792,809	-		ECD_03606	0.15	-1.2
3,792,809	-		ECD_03606	0.15	+0.2
3,792,882	+		ECD_03606	0.19	+0.7
3,792,883	-		ECD_03606	0.19	+0.3
3,792,915	+		ECD_03606	0.21	+0.8
3,792,966	+		ECD_03606	0.24	-1.1
3,792,987	+		ECD_03606	0.25	+0.1
3,792,987	+		ECD_03606	0.25	-0.2
3,792,988	-		ECD_03606	0.25	+1.5
3,792,988	-		ECD_03606	0.25	-0.4
3,792,988	-		ECD_03606	0.25	+0.6
3,792,988	-		ECD_03606	0.25	-0.6
3,793,240	-		ECD_03606	0.38	+0.7
3,793,260	-		ECD_03606	0.39	-0.7
3,793,260	-		ECD_03606	0.39	+0.4
3,793,260	-		ECD_03606	0.39	+0.9
3,793,263	+		ECD_03606	0.39	+0.1
3,793,264	-		ECD_03606	0.39	-0.2
3,793,283	+		ECD_03606	0.40	-0.4
3,793,284	-		ECD_03606	0.41	+0.3
3,793,284	-		ECD_03606	0.41	-0.1
3,793,285	+		ECD_03606	0.41	-0.1
3,793,285	+		ECD_03606	0.41	-0.3
3,793,285	+		ECD_03606	0.41	-0.5
3,793,285	+		ECD_03606	0.41	-0.2
3,793,285	+		ECD_03606	0.41	+0.2
3,793,285	+		ECD_03606	0.41	-0.2
3,793,285	+		ECD_03606	0.41	+0.0
3,793,285	+		ECD_03606	0.41	-0.2
3,793,286	-		ECD_03606	0.41	-0.2
3,793,303	-		ECD_03606	0.42	+0.9
3,793,456	-		ECD_03606	0.50	-0.1
3,793,456	-		ECD_03606	0.50	+0.0
3,793,456	-		ECD_03606	0.50	+0.4
3,793,461	+		ECD_03606	0.50	-0.9
3,793,651	+		ECD_03606	0.60	+0.5
3,793,652	-		ECD_03606	0.60	+0.1
3,793,652	-		ECD_03606	0.60	+0.0
3,793,749	+		ECD_03606	0.65	+1.2
3,793,764	-		ECD_03606	0.66	+0.6
3,793,846	+		ECD_03606	0.70	-0.4
3,793,885	-		ECD_03606	0.73	+0.3
3,793,920	-		ECD_03606	0.74	+0.3
3,793,975	+		ECD_03606	0.77	+0.5
3,793,976	-		ECD_03606	0.77	-0.2
3,793,979	+		ECD_03606	0.78	+1.4
3,793,979	+		ECD_03606	0.78	+0.1
3,794,031	+		ECD_03606	0.80	-0.3
3,794,032	-		ECD_03606	0.80	-0.1
3,794,032	-		ECD_03606	0.80	+0.2
3,794,032	-		ECD_03606	0.80	+0.1
3,794,208	+		ECD_03606	0.90	+0.0
3,794,209	-		ECD_03606	0.90	+0.1
3,794,212	+		ECD_03606	0.90	+0.9
3,794,212	+		ECD_03606	0.90	+0.4
3,794,213	-				-0.1
3,794,213	-				+0.2
3,794,213	-				+0.8
3,794,213	-				+0.6
3,794,251	-				+0.9
3,794,353	-				+0.4
3,794,400	+				+0.5
3,794,400	+				-0.4
3,794,833	+		ECD_03607	0.36	+0.5
3,795,031	+		ECD_03607	0.59	+0.2
3,795,031	+		ECD_03607	0.59	+0.3
3,795,032	-		ECD_03607	0.60	+0.4
3,795,051	+		ECD_03607	0.62	+0.7
3,795,087	-		ECD_03607	0.66	-0.4
3,795,091	-		ECD_03607	0.67	-0.2
3,795,091	-		ECD_03607	0.67	+0.8
3,795,132	+		ECD_03607	0.72	+0.5
3,795,133	-		ECD_03607	0.72	-0.0
3,795,135	+		ECD_03607	0.72	+1.0
3,795,136	-		ECD_03607	0.72	+0.1
3,795,168	+		ECD_03607	0.76	+0.0
3,795,169	-		ECD_03607	0.76	+0.3