Strain Fitness in Escherichia coli BL21 around ECD_03603

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,787,228	+		ECD_03601	0.68	-1.1
3,787,245	+		ECD_03601	0.71	-0.7
3,787,245	+		ECD_03601	0.71	+0.0
3,787,246	-		ECD_03601	0.71	+0.6
3,787,247	+		ECD_03601	0.72	-0.2
3,787,248	-		ECD_03601	0.72	+0.4
3,787,248	-		ECD_03601	0.72	+0.7
3,787,305	+		ECD_03601	0.81	-0.0
3,787,320	-		ECD_03601	0.84	+0.8
3,787,323	+		ECD_03601	0.85	+0.7
3,787,416	-				-1.0
3,787,416	-				-0.1
3,787,416	-				-0.5
3,787,423	+				+0.2
3,787,451	+				-0.2
3,787,452	-				+0.0
3,787,607	-		ECD_03602	0.18	+0.9
3,787,626	-		ECD_03602	0.21	+0.4
3,787,626	-		ECD_03602	0.21	+0.6
3,787,674	+		ECD_03602	0.28	-0.7
3,787,674	+		ECD_03602	0.28	+0.4
3,787,675	-		ECD_03602	0.28	+0.6
3,787,726	+		ECD_03602	0.35	+0.2
3,787,784	-		ECD_03602	0.43	+0.3
3,787,881	+		ECD_03602	0.56	+0.1
3,787,882	-		ECD_03602	0.56	-0.1
3,787,886	-		ECD_03602	0.57	+0.6
3,787,886	-		ECD_03602	0.57	-0.0
3,787,891	+		ECD_03602	0.58	+0.1
3,787,891	+		ECD_03602	0.58	-0.6
3,787,906	+		ECD_03602	0.60	+0.2
3,787,958	-		ECD_03602	0.67	-0.7
3,788,011	-		ECD_03602	0.74	+0.8
3,788,011	-		ECD_03602	0.74	+0.2
3,788,016	+		ECD_03602	0.75	+0.2
3,788,016	+		ECD_03602	0.75	-0.1
3,788,016	+		ECD_03602	0.75	+0.8
3,788,017	-		ECD_03602	0.75	+0.6
3,788,029	-		ECD_03602	0.77	-0.1
3,788,039	-		ECD_03602	0.78	-0.3
3,788,062	-		ECD_03602	0.81	+0.9
3,788,062	-		ECD_03602	0.81	+0.5
3,788,067	+		ECD_03602	0.82	-0.3
3,788,067	+		ECD_03602	0.82	-0.1
3,788,067	+		ECD_03602	0.82	+0.1
3,788,067	+		ECD_03602	0.82	+0.9
3,788,067	+		ECD_03602	0.82	-0.0
3,788,067	+		ECD_03602	0.82	+0.9
3,788,067	+		ECD_03602	0.82	-0.5
3,788,068	-		ECD_03602	0.82	+0.4
3,788,068	-		ECD_03602	0.82	+0.5
3,788,068	-		ECD_03602	0.82	-0.1
3,788,068	-		ECD_03602	0.82	-0.1
3,788,068	-		ECD_03602	0.82	-0.1
3,788,068	-		ECD_03602	0.82	+0.4
3,788,128	+				+0.2
3,788,128	+				+0.2
3,788,128	+				-0.7
3,788,129	-				-0.0
3,788,129	-				+0.1
3,788,130	+				-1.6
3,788,130	+				+0.6
3,788,130	+				+0.7
3,788,131	-				-0.3
3,788,131	-				+0.7
3,788,131	-				+0.3
3,788,131	-				+0.2
3,788,356	+		ECD_03603	0.12	-0.0
3,788,367	+		ECD_03603	0.13	+0.1
3,788,385	+		ECD_03603	0.15	+0.4
3,788,395	+		ECD_03603	0.16	-0.1
3,788,395	+		ECD_03603	0.16	+0.2
3,788,396	-		ECD_03603	0.16	+0.9
3,788,409	+		ECD_03603	0.17	+0.4
3,788,409	+		ECD_03603	0.17	+0.8
3,788,409	+		ECD_03603	0.17	-0.2
3,788,409	+		ECD_03603	0.17	-0.0
3,788,410	-		ECD_03603	0.17	-1.1
3,788,410	-		ECD_03603	0.17	+0.3
3,788,410	-		ECD_03603	0.17	-0.5
3,788,410	-		ECD_03603	0.17	+0.4
3,788,410	-		ECD_03603	0.17	-0.0
3,788,410	-		ECD_03603	0.17	+0.6
3,788,602	-		ECD_03603	0.33	+0.4
3,788,647	-		ECD_03603	0.37	+0.2
3,788,670	+		ECD_03603	0.39	-3.2
3,788,670	+		ECD_03603	0.39	-0.9
3,788,671	-		ECD_03603	0.39	-0.3
3,788,704	-		ECD_03603	0.42	-0.0
3,788,849	+		ECD_03603	0.54	-0.4
3,788,849	+		ECD_03603	0.54	+0.2
3,788,850	-		ECD_03603	0.55	-0.0
3,788,903	+		ECD_03603	0.59	-0.6
3,788,903	+		ECD_03603	0.59	-0.2
3,788,903	+		ECD_03603	0.59	-0.1
3,788,903	+		ECD_03603	0.59	-0.3
3,788,903	+		ECD_03603	0.59	-0.0
3,788,903	+		ECD_03603	0.59	-0.2
3,788,904	-		ECD_03603	0.59	+0.8
3,788,904	-		ECD_03603	0.59	+0.7
3,788,904	-		ECD_03603	0.59	-0.3
3,788,904	-		ECD_03603	0.59	-0.3
3,788,904	-		ECD_03603	0.59	+0.2
3,788,904	-		ECD_03603	0.59	+0.3
3,788,940	-		ECD_03603	0.62	-0.4
3,788,940	-		ECD_03603	0.62	+1.3
3,788,940	-		ECD_03603	0.62	-0.5
3,788,987	+		ECD_03603	0.66	+0.2
3,789,010	-		ECD_03603	0.68	+0.5
3,789,054	+		ECD_03603	0.72	-0.9
3,789,054	+		ECD_03603	0.72	+0.1
3,789,068	-		ECD_03603	0.73	+0.1
3,789,068	-		ECD_03603	0.73	-0.0
3,789,095	+		ECD_03603	0.75	-0.1
3,789,165	+		ECD_03603	0.81	+0.4
3,789,194	-		ECD_03603	0.84	+0.4
3,789,194	-		ECD_03603	0.84	-0.1
3,789,194	-		ECD_03603	0.84	-0.2
3,789,266	+				-0.1
3,789,266	+				+0.2
3,789,266	+				+0.2
3,789,267	-				-0.2
3,789,316	+				-0.2
3,789,337	-				+0.9
3,789,374	-				+0.3
3,789,456	-				+0.2
3,789,505	+				+0.2
3,789,505	+				-0.5
3,789,506	-				+0.4
3,789,546	-				+0.7
3,789,585	-		ECD_03604	0.11	-0.3
3,789,667	+		ECD_03604	0.16	+0.7
3,789,668	-		ECD_03604	0.16	+1.0
3,789,668	-		ECD_03604	0.16	-0.1
3,789,746	-		ECD_03604	0.21	+0.9
3,789,746	-		ECD_03604	0.21	+0.6
3,789,749	+		ECD_03604	0.21	+0.8
3,789,749	+		ECD_03604	0.21	+0.5
3,789,805	+		ECD_03604	0.25	+0.4
3,789,806	-		ECD_03604	0.25	+0.8
3,789,806	-		ECD_03604	0.25	+0.7
3,790,007	+		ECD_03604	0.37	+0.9
3,790,096	-		ECD_03604	0.43	-0.3
3,790,128	-		ECD_03604	0.45	-0.1
3,790,135	-		ECD_03604	0.45	+0.3
3,790,145	+		ECD_03604	0.46	-0.0
3,790,145	+		ECD_03604	0.46	+0.2
3,790,145	+		ECD_03604	0.46	+0.1
3,790,146	-		ECD_03604	0.46	+0.5
3,790,152	-		ECD_03604	0.46	+0.3
3,790,257	+		ECD_03604	0.53	+0.1
3,790,278	-		ECD_03604	0.54	+1.0