Strain Fitness in Escherichia coli BL21 around ECD_03546

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,728,033	+		ECD_03544	0.60	+0.2
3,728,054	+		ECD_03544	0.63	+0.4
3,728,055	-		ECD_03544	0.63	-0.2
3,728,188	+		ECD_03544	0.79	+0.9
3,728,189	-		ECD_03544	0.79	+0.2
3,728,319	+				+0.5
3,728,366	+				-0.1
3,728,374	+				-0.5
3,728,374	+				-0.5
3,728,374	+				+0.5
3,728,375	-				+0.2
3,728,377	+				-0.1
3,728,385	-				-0.4
3,728,385	-				-0.5
3,728,393	-				-0.4
3,728,444	-				+0.0
3,728,466	+				-0.2
3,728,466	+				-0.4
3,728,507	+				+0.5
3,728,508	-				+0.1
3,728,537	+				-0.2
3,728,537	+				+0.1
3,728,538	-				+0.2
3,728,538	-				+0.1
3,728,543	+				+0.4
3,728,543	+				+0.6
3,728,543	+				+0.7
3,728,544	-				+0.1
3,728,544	-				+1.4
3,728,598	+				+0.5
3,728,637	+		ECD_03545	0.19	+0.3
3,728,637	+		ECD_03545	0.19	-0.1
3,728,638	-		ECD_03545	0.19	-0.8
3,728,657	-		ECD_03545	0.26	+0.8
3,728,657	-		ECD_03545	0.26	-0.8
3,728,691	+		ECD_03545	0.37	+0.2
3,728,695	-		ECD_03545	0.38	-1.3
3,728,757	+		ECD_03545	0.60	+0.2
3,728,757	+		ECD_03545	0.60	+0.7
3,728,757	+		ECD_03545	0.60	-0.3
3,728,758	-		ECD_03545	0.60	-0.3
3,728,788	+		ECD_03545	0.70	-0.5
3,728,788	+		ECD_03545	0.70	+0.5
3,728,788	+		ECD_03545	0.70	+0.1
3,728,789	-		ECD_03545	0.70	-0.4
3,728,790	+		ECD_03545	0.71	+0.2
3,728,790	+		ECD_03545	0.71	-0.6
3,728,790	+		ECD_03545	0.71	+0.5
3,728,790	+		ECD_03545	0.71	-1.0
3,728,791	-		ECD_03545	0.71	+0.3
3,728,791	-		ECD_03545	0.71	+0.5
3,728,791	-		ECD_03545	0.71	+0.0
3,728,852	-				-0.7
3,728,856	+				-0.3
3,728,856	+				-0.6
3,728,857	-				+0.3
3,728,857	-				-0.1
3,728,873	+				+0.4
3,728,873	+				-0.8
3,728,874	-				-0.4
3,728,874	-				-0.1
3,728,874	-				-0.1
3,728,874	-				-0.2
3,728,874	-				-0.1
3,728,874	-				-0.1
3,728,889	+				+1.6
3,728,889	+				+0.2
3,728,890	-				-0.6
3,729,008	+				-0.8
3,729,008	+				-0.2
3,729,012	-				+1.1
3,729,048	-				-0.5
3,729,050	+				+1.1
3,729,237	+		ECD_03546	0.24	+0.6
3,729,303	-		ECD_03546	0.29	-0.0
3,729,303	-		ECD_03546	0.29	+1.0
3,729,303	-		ECD_03546	0.29	-0.6
3,729,377	+		ECD_03546	0.34	+0.2
3,729,377	+		ECD_03546	0.34	-0.6
3,729,378	-		ECD_03546	0.34	+1.0
3,729,378	-		ECD_03546	0.34	-0.2
3,729,378	-		ECD_03546	0.34	+0.6
3,729,379	+		ECD_03546	0.34	+0.2
3,729,379	+		ECD_03546	0.34	+0.6
3,729,379	+		ECD_03546	0.34	+1.1
3,729,380	-		ECD_03546	0.34	-0.1
3,729,380	-		ECD_03546	0.34	+0.7
3,729,380	-		ECD_03546	0.34	-0.2
3,729,380	-		ECD_03546	0.34	-0.2
3,729,380	-		ECD_03546	0.34	-0.3
3,729,380	-		ECD_03546	0.34	+0.2
3,729,380	-		ECD_03546	0.34	-0.7
3,729,394	+		ECD_03546	0.35	-0.1
3,729,394	+		ECD_03546	0.35	+0.4
3,729,394	+		ECD_03546	0.35	+0.3
3,729,394	+		ECD_03546	0.35	+1.1
3,729,395	-		ECD_03546	0.35	-0.2
3,729,395	-		ECD_03546	0.35	+0.7
3,729,395	-		ECD_03546	0.35	-0.4
3,729,468	+		ECD_03546	0.41	+1.1
3,729,468	+		ECD_03546	0.41	+0.1
3,729,469	-		ECD_03546	0.41	+0.5
3,729,469	-		ECD_03546	0.41	+1.4
3,729,482	+		ECD_03546	0.42	-0.0
3,729,545	+		ECD_03546	0.46	+0.6
3,729,546	-		ECD_03546	0.46	-0.0
3,729,645	-		ECD_03546	0.54	+0.7
3,729,772	-		ECD_03546	0.63	-0.4
3,729,792	-		ECD_03546	0.65	+1.6
3,729,792	-		ECD_03546	0.65	+0.3
3,729,843	-		ECD_03546	0.68	+0.1
3,729,843	-		ECD_03546	0.68	-0.5
3,729,843	-		ECD_03546	0.68	-0.1
3,729,885	-		ECD_03546	0.71	+0.1
3,730,094	+		ECD_03546	0.87	-0.1
3,730,095	-		ECD_03546	0.87	+0.5
3,730,095	-		ECD_03546	0.87	+1.7
3,730,150	-				+0.5
3,730,214	+				+0.7
3,730,294	+				-0.4
3,730,295	-				+0.1
3,730,319	-				+1.0
3,730,382	+		ECD_03547	0.14	-0.4
3,730,383	-		ECD_03547	0.15	+0.5
3,730,592	-		ECD_03547	0.61	-0.3
3,730,596	+		ECD_03547	0.62	+0.5
3,730,650	+		ECD_03547	0.74	-0.4
3,730,651	-		ECD_03547	0.74	+0.2
3,730,800	-				+0.1
3,730,800	-				+0.5
3,730,820	+				+0.6
3,730,821	-				-0.2
3,730,821	-				-0.6
3,730,823	+				-0.2
3,730,824	-				+1.0
3,730,824	-				+0.4
3,730,923	-				+0.5
3,730,929	+				-0.9
3,730,930	-				+0.1
3,730,986	+		ECD_03548	0.12	+0.3
3,730,987	-		ECD_03548	0.12	+0.9
3,731,011	-		ECD_03548	0.14	+0.1
3,731,124	+		ECD_03548	0.23	+0.4
3,731,124	+		ECD_03548	0.23	-0.2
3,731,125	-		ECD_03548	0.23	+0.0
3,731,125	-		ECD_03548	0.23	-0.2
3,731,139	+		ECD_03548	0.24	-1.8
3,731,140	-		ECD_03548	0.24	-0.0
3,731,140	-		ECD_03548	0.24	+0.1
3,731,196	+		ECD_03548	0.28	-0.4
3,731,207	+		ECD_03548	0.29	+0.6
3,731,207	+		ECD_03548	0.29	-0.3
3,731,268	-		ECD_03548	0.33	+0.3