Strain Fitness in Escherichia coli BL21 around ECD_03375

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,540,712	+		ECD_03374	0.11	+0.0
3,540,712	+		ECD_03374	0.11	-0.5
3,540,712	+		ECD_03374	0.11	-0.3
3,540,712	+		ECD_03374	0.11	-0.2
3,540,713	-		ECD_03374	0.11	-0.6
3,540,754	+		ECD_03374	0.16	+0.1
3,540,754	+		ECD_03374	0.16	+0.0
3,540,783	+		ECD_03374	0.19	+0.4
3,540,825	+		ECD_03374	0.23	-0.1
3,540,826	-		ECD_03374	0.24	+1.0
3,540,826	-		ECD_03374	0.24	+0.1
3,540,868	+		ECD_03374	0.28	-0.9
3,540,869	-		ECD_03374	0.28	+0.4
3,540,871	+		ECD_03374	0.28	-0.4
3,540,871	+		ECD_03374	0.28	-0.1
3,540,872	-		ECD_03374	0.28	-1.0
3,540,872	-		ECD_03374	0.28	-0.1
3,540,872	-		ECD_03374	0.28	-0.3
3,540,901	-		ECD_03374	0.32	-0.1
3,540,907	+		ECD_03374	0.32	-0.4
3,540,908	-		ECD_03374	0.32	+0.8
3,540,908	-		ECD_03374	0.32	-0.2
3,540,911	-		ECD_03374	0.33	+0.1
3,540,995	-		ECD_03374	0.42	-0.3
3,541,108	-		ECD_03374	0.54	+0.4
3,541,108	-		ECD_03374	0.54	-0.9
3,541,111	+		ECD_03374	0.54	+0.2
3,541,111	+		ECD_03374	0.54	-0.2
3,541,112	-		ECD_03374	0.54	+0.6
3,541,112	-		ECD_03374	0.54	-0.7
3,541,482	+				-0.3
3,541,482	+				-0.7
3,541,545	+				+0.6
3,541,546	-				-0.3
3,541,592	+				+0.3
3,541,593	-				+0.7
3,541,596	+				+0.0
3,541,597	-				-0.1
3,541,597	-				-0.1
3,541,612	+				+0.0
3,541,634	-				-0.1
3,541,634	-				+0.1
3,541,668	+				-0.1
3,541,668	+				-0.5
3,541,668	+				-0.2
3,541,669	-				-0.7
3,541,669	-				-0.3
3,541,785	+		ECD_03375	0.10	+0.3
3,541,786	-		ECD_03375	0.10	-0.4
3,541,788	+		ECD_03375	0.10	-0.1
3,541,850	+		ECD_03375	0.15	-2.2
3,541,851	-		ECD_03375	0.15	-0.3
3,541,879	+		ECD_03375	0.16	-0.9
3,541,880	-		ECD_03375	0.17	-1.4
3,541,963	+		ECD_03375	0.22	-0.2
3,542,008	-		ECD_03375	0.25	-0.9
3,542,076	-		ECD_03375	0.30	-0.5
3,542,301	-		ECD_03375	0.45	-0.8
3,542,301	-		ECD_03375	0.45	-0.4
3,542,333	+		ECD_03375	0.47	-0.7
3,542,333	+		ECD_03375	0.47	-1.1
3,542,334	-		ECD_03375	0.47	-0.8
3,542,334	-		ECD_03375	0.47	-0.3
3,542,336	+		ECD_03375	0.47	-1.3
3,542,336	+		ECD_03375	0.47	-0.3
3,542,336	+		ECD_03375	0.47	-0.7
3,542,337	-		ECD_03375	0.47	-1.3
3,542,337	-		ECD_03375	0.47	-1.2
3,542,424	+		ECD_03375	0.53	-0.4
3,542,492	-		ECD_03375	0.57	-0.4
3,542,492	-		ECD_03375	0.57	-0.7
3,542,566	-		ECD_03375	0.62	+0.2
3,542,566	-		ECD_03375	0.62	-0.8
3,542,566	-		ECD_03375	0.62	-0.4
3,542,610	-		ECD_03375	0.65	-0.1
3,542,610	-		ECD_03375	0.65	-0.9
3,542,610	-		ECD_03375	0.65	-1.9
3,542,760	-		ECD_03375	0.75	-0.2
3,542,777	-		ECD_03375	0.76	-0.6
3,542,787	+		ECD_03375	0.77	+0.4
3,542,788	-		ECD_03375	0.77	-0.2
3,542,879	+		ECD_03375	0.83	-1.1
3,542,916	-		ECD_03375	0.86	-0.0
3,542,937	-		ECD_03375	0.87	-1.1
3,542,940	-		ECD_03375	0.87	-1.1
3,543,003	+				-1.0
3,543,067	+				-0.9
3,543,068	-				-1.5
3,543,068	-				+0.4
3,543,146	+				-0.4
3,543,186	-				-0.1
3,543,195	+				-0.8
3,543,251	+				-0.3
3,543,274	+				-1.4
3,543,275	-				+0.2
3,543,297	+				-0.1
3,543,338	-				-0.1
3,543,338	-				+0.0
3,543,338	-				+0.3
3,543,358	+				-0.4
3,543,358	+				-0.0
3,543,359	-				-0.0
3,543,438	+				-0.1
3,543,439	-				-0.3
3,543,439	-				-0.0
3,543,439	-				+0.2
3,543,439	-				+0.1
3,543,457	+				+0.0
3,543,502	-		ECD_03376	0.12	-0.4
3,543,502	-		ECD_03376	0.12	-0.1
3,543,615	+		ECD_03376	0.21	+0.1
3,543,615	+		ECD_03376	0.21	-0.2
3,543,616	-		ECD_03376	0.21	+0.4
3,543,637	+		ECD_03376	0.22	+0.4
3,543,713	+		ECD_03376	0.28	+0.8
3,543,713	+		ECD_03376	0.28	-0.6
3,543,713	+		ECD_03376	0.28	+0.3
3,543,714	-		ECD_03376	0.28	+0.4
3,543,715	+		ECD_03376	0.28	+0.1
3,543,716	-		ECD_03376	0.29	+0.4
3,543,716	-		ECD_03376	0.29	+0.2
3,543,778	-		ECD_03376	0.33	+0.2
3,543,892	-		ECD_03376	0.42	-0.4
3,543,926	-		ECD_03376	0.45	-0.3
3,543,945	+		ECD_03376	0.46	-0.4
3,543,951	+		ECD_03376	0.47	-0.2
3,543,951	+		ECD_03376	0.47	-0.4
3,543,951	+		ECD_03376	0.47	+0.5
3,543,952	-		ECD_03376	0.47	-0.0
3,543,952	-		ECD_03376	0.47	+0.3
3,543,956	+		ECD_03376	0.47	+0.4
3,543,966	+		ECD_03376	0.48	+1.4
3,544,017	+		ECD_03376	0.52	+0.2
3,544,017	+		ECD_03376	0.52	-0.2
3,544,044	+		ECD_03376	0.54	-0.3
3,544,044	+		ECD_03376	0.54	-0.1
3,544,045	-		ECD_03376	0.54	+0.4
3,544,065	+		ECD_03376	0.56	-0.5
3,544,066	-		ECD_03376	0.56	+0.3