Strain Fitness in Escherichia coli BL21 around ECD_03224

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,361,820	+				-0.1
3,361,820	+				+0.4
3,361,820	+				-0.2
3,361,823	+				+0.2
3,361,823	+				+0.1
3,361,824	-				+0.1
3,361,824	-				+0.4
3,361,824	-				+0.8
3,361,824	-				-0.0
3,361,824	-				-0.2
3,361,824	-				-0.3
3,361,824	-				-0.6
3,361,831	+				+0.3
3,361,865	+				+0.2
3,361,866	-				-0.1
3,361,869	-				-0.2
3,361,890	-				+0.4
3,361,923	+				-0.1
3,361,952	+				+0.3
3,361,952	+				+0.1
3,361,953	-				+0.2
3,361,953	-				+0.2
3,362,071	+		ECD_03223	0.16	+0.2
3,362,115	+		ECD_03223	0.21	-0.1
3,362,115	+		ECD_03223	0.21	+0.0
3,362,116	-		ECD_03223	0.21	+0.7
3,362,116	-		ECD_03223	0.21	+0.1
3,362,116	-		ECD_03223	0.21	+0.1
3,362,138	+		ECD_03223	0.24	+0.8
3,362,138	+		ECD_03223	0.24	-0.0
3,362,139	-		ECD_03223	0.24	-0.3
3,362,139	-		ECD_03223	0.24	+0.1
3,362,139	-		ECD_03223	0.24	-0.7
3,362,163	+		ECD_03223	0.27	+0.0
3,362,164	-		ECD_03223	0.27	+0.5
3,362,164	-		ECD_03223	0.27	-0.4
3,362,164	-		ECD_03223	0.27	+0.2
3,362,164	-		ECD_03223	0.27	-0.4
3,362,165	+		ECD_03223	0.27	+0.5
3,362,166	-		ECD_03223	0.27	+0.8
3,362,166	-		ECD_03223	0.27	+0.2
3,362,166	-		ECD_03223	0.27	-0.0
3,362,189	+		ECD_03223	0.30	-1.0
3,362,189	+		ECD_03223	0.30	-0.1
3,362,189	+		ECD_03223	0.30	+0.2
3,362,190	-		ECD_03223	0.30	+0.1
3,362,190	-		ECD_03223	0.30	+0.0
3,362,190	-		ECD_03223	0.30	-0.0
3,362,258	+		ECD_03223	0.38	+0.0
3,362,258	+		ECD_03223	0.38	-1.1
3,362,259	-		ECD_03223	0.38	-0.4
3,362,259	-		ECD_03223	0.38	+0.6
3,362,286	+		ECD_03223	0.42	+0.1
3,362,300	+		ECD_03223	0.43	+0.7
3,362,300	+		ECD_03223	0.43	+0.2
3,362,301	-		ECD_03223	0.43	+0.1
3,362,301	-		ECD_03223	0.43	+0.7
3,362,301	-		ECD_03223	0.43	-0.6
3,362,301	-		ECD_03223	0.43	+0.4
3,362,306	+		ECD_03223	0.44	+0.2
3,362,332	+		ECD_03223	0.47	+0.5
3,362,332	+		ECD_03223	0.47	-0.5
3,362,349	+		ECD_03223	0.49	-0.5
3,362,418	-		ECD_03223	0.57	-0.8
3,362,418	-		ECD_03223	0.57	+1.3
3,362,497	-		ECD_03223	0.67	+1.1
3,362,523	+		ECD_03223	0.70	-0.6
3,362,548	+		ECD_03223	0.73	+0.0
3,362,548	+		ECD_03223	0.73	+0.1
3,362,548	+		ECD_03223	0.73	+0.4
3,362,549	-		ECD_03223	0.73	-0.6
3,362,549	-		ECD_03223	0.73	+0.4
3,362,561	+		ECD_03223	0.75	-0.6
3,362,561	+		ECD_03223	0.75	-1.3
3,362,562	-		ECD_03223	0.75	+0.4
3,362,595	+		ECD_03223	0.79	-0.7
3,362,595	+		ECD_03223	0.79	-0.0
3,362,596	-		ECD_03223	0.79	-1.2
3,362,646	-		ECD_03223	0.85	-0.7
3,362,668	-		ECD_03223	0.87	+0.1
3,362,672	+		ECD_03223	0.88	-0.3
3,362,672	+		ECD_03223	0.88	+0.2
3,362,694	+				+0.2
3,362,694	+				-0.1
3,362,694	+				+0.2
3,362,694	+				-1.8
3,362,694	+				-0.3
3,362,694	+				+0.6
3,362,695	-				+0.4
3,362,695	-				-0.5
3,362,695	-				+0.0
3,362,696	+				+0.4
3,362,697	-				+0.1
3,362,697	-				-0.1
3,362,715	+				+0.7
3,362,807	-				-0.1
3,362,864	+		ECD_03224	0.12	-0.2
3,362,864	+		ECD_03224	0.12	-0.4
3,362,865	-		ECD_03224	0.12	-1.0
3,362,865	-		ECD_03224	0.12	+0.3
3,362,883	+		ECD_03224	0.15	+0.2
3,362,884	-		ECD_03224	0.15	-0.6
3,362,884	-		ECD_03224	0.15	+0.3
3,362,899	+		ECD_03224	0.17	-0.0
3,362,899	+		ECD_03224	0.17	+0.4
3,362,899	+		ECD_03224	0.17	+0.9
3,362,899	+		ECD_03224	0.17	-0.0
3,362,899	+		ECD_03224	0.17	-0.0
3,362,900	-		ECD_03224	0.17	+1.1
3,363,047	+		ECD_03224	0.35	+0.5
3,363,093	-		ECD_03224	0.41	+0.3
3,363,093	-		ECD_03224	0.41	+0.8
3,363,093	-		ECD_03224	0.41	+0.3
3,363,184	+		ECD_03224	0.53	+0.3
3,363,184	+		ECD_03224	0.53	+0.0
3,363,551	+				-0.0
3,363,555	+				-0.1
3,363,555	+				+0.6
3,363,555	+				-0.4
3,363,556	-				-0.3
3,363,556	-				-0.6
3,363,557	+				-0.8
3,363,558	-				+0.7
3,363,595	-				+0.3
3,363,595	-				-0.5
3,363,617	-				+0.3
3,363,652	+				+0.9
3,363,653	-				-0.5
3,363,779	-		ECD_03225	0.17	+1.5
3,363,779	-		ECD_03225	0.17	-0.9
3,363,785	+		ECD_03225	0.18	-0.8
3,363,785	+		ECD_03225	0.18	-0.1
3,363,785	+		ECD_03225	0.18	+1.2
3,363,785	+		ECD_03225	0.18	-0.1
3,363,785	+		ECD_03225	0.18	-1.0
3,363,785	+		ECD_03225	0.18	-0.6
3,363,786	-		ECD_03225	0.18	-0.4
3,363,786	-		ECD_03225	0.18	+0.4
3,363,786	-		ECD_03225	0.18	-0.5
3,363,786	-		ECD_03225	0.18	-0.7
3,363,786	-		ECD_03225	0.18	-0.4
3,363,844	-		ECD_03225	0.26	-0.5
3,363,876	+		ECD_03225	0.30	-0.8
3,363,877	-		ECD_03225	0.31	-1.1
3,363,877	-		ECD_03225	0.31	+0.3
3,363,907	+		ECD_03225	0.35	+0.4
3,363,907	+		ECD_03225	0.35	-0.9
3,363,908	-		ECD_03225	0.35	+0.2
3,363,908	-		ECD_03225	0.35	+0.8
3,363,908	-		ECD_03225	0.35	-0.7
3,364,058	+		ECD_03225	0.55	-0.7
3,364,059	-		ECD_03225	0.55	+0.2
3,364,059	-		ECD_03225	0.55	-0.1
3,364,059	-		ECD_03225	0.55	-0.2
3,364,059	-		ECD_03225	0.55	-0.8
3,364,059	-		ECD_03225	0.55	+0.3
3,364,082	-		ECD_03225	0.59	-0.1
3,364,087	+		ECD_03225	0.59	-0.2
3,364,087	+		ECD_03225	0.59	-0.2
3,364,087	+		ECD_03225	0.59	+0.1
3,364,087	+		ECD_03225	0.59	-0.4
3,364,087	+		ECD_03225	0.59	-0.4
3,364,155	-		ECD_03225	0.69	-1.9
3,364,537	+				+0.0
3,364,537	+				-0.9
3,364,537	+				-0.2
3,364,550	+				-0.3
3,364,550	+				-0.1