Strain Fitness in Escherichia coli BL21 around ECD_03211

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,348,920	+		ECD_03210	0.29	+0.3
3,349,060	+		ECD_03210	0.41	+0.1
3,349,060	+		ECD_03210	0.41	-0.3
3,349,061	-		ECD_03210	0.41	-0.6
3,349,061	-		ECD_03210	0.41	+0.3
3,349,061	-		ECD_03210	0.41	+1.2
3,349,061	-		ECD_03210	0.41	-0.1
3,349,061	-		ECD_03210	0.41	-0.1
3,349,380	-		ECD_03210	0.67	-0.5
3,349,400	+		ECD_03210	0.69	-0.3
3,349,400	+		ECD_03210	0.69	+0.4
3,349,401	-		ECD_03210	0.69	-0.6
3,349,434	-		ECD_03210	0.71	-0.7
3,349,449	-		ECD_03210	0.73	-1.0
3,349,470	-		ECD_03210	0.74	-0.6
3,349,554	-		ECD_03210	0.81	-0.4
3,349,651	+		ECD_03210	0.89	+0.1
3,349,652	-		ECD_03210	0.89	+0.6
3,349,652	-		ECD_03210	0.89	+0.5
3,349,703	+				-0.6
3,349,704	-				+0.5
3,349,721	-				-0.6
3,349,721	-				+0.1
3,349,798	+				-0.5
3,349,798	+				-0.1
3,349,799	-				+0.2
3,349,799	-				+0.4
3,349,799	-				-0.4
3,349,799	-				-0.1
3,349,821	-				-0.4
3,349,834	-				+1.5
3,349,917	+				+0.1
3,350,021	-		ECD_03211	0.27	-0.1
3,350,052	-		ECD_03211	0.33	+0.4
3,350,064	+		ECD_03211	0.35	-1.1
3,350,103	+		ECD_03211	0.42	+0.1
3,350,103	+		ECD_03211	0.42	-0.1
3,350,268	+		ECD_03211	0.71	-0.3
3,350,269	-		ECD_03211	0.71	+0.3
3,350,269	-		ECD_03211	0.71	-0.2
3,350,409	-				-0.1
3,350,409	-				-0.0
3,350,409	-				+0.2
3,350,409	-				-0.0
3,350,412	+				+0.6
3,350,413	-				-0.4
3,350,413	-				+0.4
3,350,413	-				-0.4
3,350,416	+				+0.3
3,350,416	+				-0.7
3,350,416	+				-0.0
3,350,417	-				-0.2
3,350,417	-				-0.6
3,350,417	-				+1.3
3,350,418	+				+0.4
3,350,418	+				-0.3
3,350,419	-				-0.1
3,350,459	-				+0.8
3,350,463	+				-0.2
3,350,498	-				+0.5
3,350,498	-				+0.3
3,350,501	+				-0.0
3,350,502	-				-1.1
3,350,683	-		ECD_03212	0.37	+0.1
3,350,685	+		ECD_03212	0.37	+1.0
3,350,866	-		ECD_03212	0.67	+0.6
3,350,881	+		ECD_03212	0.69	-0.9
3,351,010	+				+0.4
3,351,010	+				+0.1
3,351,024	+				+1.2
3,351,025	-				+1.2
3,351,030	+				-0.6
3,351,030	+				-0.0
3,351,056	-				+0.2
3,351,064	+				-0.8
3,351,065	-				+0.2
3,351,111	-		ECD_03213	0.34	-0.0
3,351,111	-		ECD_03213	0.34	-0.2
3,351,165	-		ECD_03213	0.66	-0.8
3,351,257	+				+0.8
3,351,257	+				-0.1
3,351,257	+				+0.2
3,351,258	-				-1.5
3,351,258	-				-1.1
3,351,258	-				+0.0
3,351,258	-				-0.0
3,351,260	-				+0.8
3,351,327	+				+0.2
3,351,381	+				+0.9