Strain Fitness in Escherichia coli BL21 around ECD_03101

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,248,372	+		ECD_03100	0.50	+0.6
3,248,426	+		ECD_03100	0.53	+0.4
3,248,428	+		ECD_03100	0.53	+0.2
3,248,428	+		ECD_03100	0.53	+0.2
3,248,428	+		ECD_03100	0.53	+0.2
3,248,428	+		ECD_03100	0.53	-0.2
3,248,429	-		ECD_03100	0.53	+0.9
3,248,429	-		ECD_03100	0.53	+0.2
3,248,546	+		ECD_03100	0.59	-0.1
3,248,584	+		ECD_03100	0.61	-0.3
3,248,584	+		ECD_03100	0.61	+0.2
3,248,624	+		ECD_03100	0.63	+1.2
3,248,624	+		ECD_03100	0.63	+0.7
3,248,637	+		ECD_03100	0.64	+0.0
3,248,700	+		ECD_03100	0.67	-0.2
3,248,769	-		ECD_03100	0.70	+0.7
3,248,781	+		ECD_03100	0.71	+1.1
3,248,782	-		ECD_03100	0.71	-0.1
3,248,782	-		ECD_03100	0.71	+0.6
3,248,868	-		ECD_03100	0.75	+0.4
3,248,882	+		ECD_03100	0.76	+1.1
3,248,901	-		ECD_03100	0.77	-1.4
3,249,013	-		ECD_03100	0.83	-0.7
3,249,125	+		ECD_03100	0.89	+0.6
3,249,126	-		ECD_03100	0.89	+0.0
3,249,126	-		ECD_03100	0.89	+0.3
3,249,285	+				-0.3
3,249,285	+				+0.2
3,249,285	+				+0.3
3,249,286	-				-0.3
3,249,307	-				+0.3
3,249,344	+				+0.0
3,249,445	+				+0.1
3,249,446	-				-0.0
3,249,496	+		ECD_03101	0.15	+0.5
3,249,497	-		ECD_03101	0.15	+0.6
3,249,497	-		ECD_03101	0.15	+0.8
3,249,497	-		ECD_03101	0.15	-0.1
3,249,607	+		ECD_03101	0.27	+0.3
3,249,608	-		ECD_03101	0.27	-0.3
3,249,608	-		ECD_03101	0.27	-0.4
3,249,702	+		ECD_03101	0.37	+0.9
3,249,702	+		ECD_03101	0.37	+0.2
3,249,702	+		ECD_03101	0.37	-0.4
3,249,702	+		ECD_03101	0.37	-2.4
3,249,702	+		ECD_03101	0.37	-0.7
3,249,702	+		ECD_03101	0.37	-1.1
3,249,710	+		ECD_03101	0.38	+0.5
3,249,714	+		ECD_03101	0.38	-0.1
3,249,714	+		ECD_03101	0.38	-0.3
3,249,715	-		ECD_03101	0.38	-0.2
3,249,763	+		ECD_03101	0.44	+0.7
3,249,764	-		ECD_03101	0.44	+0.2
3,249,777	+		ECD_03101	0.45	-0.2
3,249,777	+		ECD_03101	0.45	+0.7
3,249,777	+		ECD_03101	0.45	+1.9
3,249,896	+		ECD_03101	0.58	+0.4
3,249,897	-		ECD_03101	0.58	+0.0
3,249,897	-		ECD_03101	0.58	-0.7
3,249,900	-		ECD_03101	0.58	+0.7
3,249,900	-		ECD_03101	0.58	+0.8
3,249,956	-		ECD_03101	0.64	-0.1
3,249,992	+		ECD_03101	0.68	-0.0
3,249,993	-		ECD_03101	0.68	-0.9
3,249,999	+		ECD_03101	0.69	-0.1
3,250,002	+		ECD_03101	0.69	-1.1
3,250,002	+		ECD_03101	0.69	-0.0
3,250,003	-		ECD_03101	0.69	-0.2
3,250,067	+		ECD_03101	0.76	+0.3
3,250,068	-		ECD_03101	0.76	+0.2
3,250,194	+		ECD_03101	0.90	-0.4
3,250,195	-				-0.0
3,250,197	+				+0.2
3,250,198	-				-0.1
3,250,210	+				+0.4
3,250,239	-				-0.3
3,250,241	+				+0.4
3,250,274	+				+1.6
3,250,321	+		ECD_03102	0.12	+0.3
3,250,322	-		ECD_03102	0.13	-0.6
3,250,336	+		ECD_03102	0.20	-0.2
3,250,336	+		ECD_03102	0.20	+0.3
3,250,337	-		ECD_03102	0.20	+0.5
3,250,378	+		ECD_03102	0.40	+0.1
3,250,383	-		ECD_03102	0.43	+0.4
3,250,383	-		ECD_03102	0.43	-0.5
3,250,383	-		ECD_03102	0.43	-0.1
3,250,398	+		ECD_03102	0.50	+0.3
3,250,431	+		ECD_03102	0.66	+0.8
3,250,514	+				-0.2
3,250,515	-				+0.1
3,250,515	-				+0.5
3,250,515	-				+1.2
3,250,536	-				+0.2
3,250,606	-				+0.4
3,250,606	-				-0.3
3,250,609	+				+0.8
3,250,613	-				+0.4
3,250,614	+				+0.4
3,250,614	+				-0.2
3,250,614	+				-0.2
3,250,615	-				+0.6
3,250,637	+				+0.8
3,250,641	+				+0.2
3,250,655	+				+1.1
3,250,719	+				+0.3
3,250,758	+				+1.8
3,250,759	-				+0.3
3,250,759	-				+0.2
3,250,759	-				+0.2
3,250,818	+		ECD_03103	0.15	+0.7
3,250,827	+		ECD_03103	0.16	+0.0
3,250,875	-		ECD_03103	0.21	+0.4
3,250,931	+		ECD_03103	0.27	-0.6
3,250,931	+		ECD_03103	0.27	+0.0
3,250,931	+		ECD_03103	0.27	+0.2
3,250,932	-		ECD_03103	0.27	+0.0
3,250,984	+		ECD_03103	0.32	-0.7
3,251,033	+		ECD_03103	0.38	+0.3
3,251,211	+		ECD_03103	0.57	+1.1
3,251,255	+		ECD_03103	0.62	-0.2
3,251,256	-		ECD_03103	0.62	-0.6