Strain Fitness in Escherichia coli BL21 around ECD_03076

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,220,641	-		ECD_03075	0.62	+0.5
3,220,777	+		ECD_03075	0.68	-0.5
3,220,778	-		ECD_03075	0.68	-1.5
3,220,781	-		ECD_03075	0.68	-1.2
3,220,844	-		ECD_03075	0.71	-0.5
3,220,860	-		ECD_03075	0.72	-1.4
3,221,055	+		ECD_03075	0.80	+1.5
3,221,193	-		ECD_03075	0.86	-1.8
3,221,314	+				+0.5
3,221,315	-				-0.8
3,221,361	-				+3.5
3,221,413	-				+0.0
3,221,473	-				-0.0
3,221,494	+				-0.7
3,221,494	+				-0.3
3,221,495	-				+0.3
3,221,497	+				+0.6
3,221,497	+				-0.7
3,221,498	-				-0.7
3,221,498	-				-2.2
3,221,558	-				+0.0
3,221,577	+				+0.3
3,221,577	+				+0.3
3,221,577	+				-0.8
3,221,577	+				+0.6
3,221,578	-				-0.1
3,221,578	-				+0.1
3,221,578	-				+0.4
3,221,578	-				-0.2
3,221,622	+				+0.1
3,221,778	+		ECD_03076	0.17	+1.1
3,221,778	+		ECD_03076	0.17	-0.7
3,221,779	-		ECD_03076	0.17	+0.1
3,221,779	-		ECD_03076	0.17	+0.3
3,221,779	-		ECD_03076	0.17	-0.4
3,221,779	-		ECD_03076	0.17	+0.4
3,221,829	+		ECD_03076	0.22	+0.0
3,221,829	+		ECD_03076	0.22	-1.0
3,221,830	-		ECD_03076	0.22	-0.7
3,221,899	+		ECD_03076	0.30	-0.3
3,221,918	+		ECD_03076	0.32	+0.5
3,221,999	+		ECD_03076	0.41	-0.0
3,221,999	+		ECD_03076	0.41	-0.9
3,221,999	+		ECD_03076	0.41	+0.4
3,222,000	-		ECD_03076	0.41	+0.3
3,222,000	-		ECD_03076	0.41	-0.2
3,222,000	-		ECD_03076	0.41	+0.0
3,222,046	+		ECD_03076	0.46	+1.3
3,222,046	+		ECD_03076	0.46	-0.3
3,222,046	+		ECD_03076	0.46	-0.2
3,222,151	+		ECD_03076	0.57	-0.3
3,222,151	+		ECD_03076	0.57	+0.8
3,222,151	+		ECD_03076	0.57	-0.5
3,222,151	+		ECD_03076	0.57	-0.3
3,222,152	-		ECD_03076	0.57	+0.1
3,222,224	-		ECD_03076	0.65	+0.3
3,222,250	-		ECD_03076	0.68	-0.6
3,222,250	-		ECD_03076	0.68	-0.1
3,222,250	-		ECD_03076	0.68	-0.2
3,222,253	+		ECD_03076	0.68	+0.2
3,222,253	+		ECD_03076	0.68	-0.3
3,222,253	+		ECD_03076	0.68	+0.2
3,222,253	+		ECD_03076	0.68	-0.2
3,222,253	+		ECD_03076	0.68	+0.6
3,222,254	-		ECD_03076	0.68	-0.7
3,222,254	-		ECD_03076	0.68	+0.7
3,222,254	-		ECD_03076	0.68	-0.1
3,222,254	-		ECD_03076	0.68	-1.5
3,222,254	-		ECD_03076	0.68	-0.2
3,222,254	-		ECD_03076	0.68	+0.6
3,222,290	-		ECD_03076	0.72	+0.3
3,222,291	+		ECD_03076	0.72	-0.1
3,222,291	+		ECD_03076	0.72	-0.4
3,222,312	+		ECD_03076	0.74	+0.4
3,222,313	-		ECD_03076	0.74	-0.7
3,222,313	-		ECD_03076	0.74	-0.4
3,222,332	+		ECD_03076	0.76	-1.3
3,222,407	-		ECD_03076	0.85	-0.6
3,222,482	-				-0.2
3,222,482	-				-0.4
3,222,482	-				-0.3
3,222,482	-				+0.0
3,222,482	-				+1.3
3,222,526	+				-0.3
3,222,526	+				-0.6
3,222,527	-				+0.3
3,222,533	+				+0.6
3,222,845	-				-0.9
3,222,973	+				-0.1
3,222,974	-				-0.3
3,222,974	-				-0.1
3,222,985	-				-1.4
3,223,048	+				+0.5
3,223,052	+				-1.6
3,223,082	+				-0.4
3,223,224	+				-0.2
3,223,224	+				-1.1
3,223,224	+				-1.5
3,223,224	+				+0.0
3,223,231	+				-0.8
3,223,236	+				-1.1
3,223,254	+				-1.4
3,223,283	+				-1.6
3,223,283	+				-1.5
3,223,283	+				-0.3
3,223,283	+				-2.1
3,223,283	+				-0.8
3,223,284	-				-1.0
3,223,284	-				-1.3
3,223,307	+				-1.2
3,223,307	+				-1.8
3,223,314	+				-1.3
3,223,323	-				-1.7
3,223,465	+				-1.0
3,223,481	+				-0.3
3,223,481	+				-1.2
3,223,482	-				-1.6
3,223,492	-				-1.8