Strain Fitness in Escherichia coli BL21 around ECD_03013

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,160,022	-		ECD_03012	0.17	+0.4
3,160,025	+		ECD_03012	0.17	-0.3
3,160,032	-		ECD_03012	0.18	+0.3
3,160,032	-		ECD_03012	0.18	+0.5
3,160,041	+		ECD_03012	0.18	+0.4
3,160,041	+		ECD_03012	0.18	-0.1
3,160,041	+		ECD_03012	0.18	-0.8
3,160,041	+		ECD_03012	0.18	-0.1
3,160,042	-		ECD_03012	0.18	+0.5
3,160,083	+		ECD_03012	0.22	-1.1
3,160,083	+		ECD_03012	0.22	+0.1
3,160,083	+		ECD_03012	0.22	+0.8
3,160,084	-		ECD_03012	0.22	-0.6
3,160,084	-		ECD_03012	0.22	+0.2
3,160,084	-		ECD_03012	0.22	+0.0
3,160,084	-		ECD_03012	0.22	+0.5
3,160,084	-		ECD_03012	0.22	-0.6
3,160,085	+		ECD_03012	0.22	+0.6
3,160,085	+		ECD_03012	0.22	-0.2
3,160,086	-		ECD_03012	0.23	-0.6
3,160,100	-		ECD_03012	0.24	+0.2
3,160,103	+		ECD_03012	0.24	-0.1
3,160,103	+		ECD_03012	0.24	-0.6
3,160,103	+		ECD_03012	0.24	-0.3
3,160,104	-		ECD_03012	0.24	-1.0
3,160,129	-		ECD_03012	0.26	+0.3
3,160,132	-		ECD_03012	0.27	-0.3
3,160,157	+		ECD_03012	0.29	-0.3
3,160,158	-		ECD_03012	0.29	+0.2
3,160,217	+		ECD_03012	0.35	-0.0
3,160,238	-		ECD_03012	0.36	+0.2
3,160,238	-		ECD_03012	0.36	+0.3
3,160,252	+		ECD_03012	0.38	-0.0
3,160,252	+		ECD_03012	0.38	-0.2
3,160,252	+		ECD_03012	0.38	+0.6
3,160,255	-		ECD_03012	0.38	-0.3
3,160,292	+		ECD_03012	0.41	-0.7
3,160,292	+		ECD_03012	0.41	-1.7
3,160,292	+		ECD_03012	0.41	+1.9
3,160,293	-		ECD_03012	0.41	-0.1
3,160,460	-		ECD_03012	0.57	-0.1
3,160,460	-		ECD_03012	0.57	+1.1
3,160,527	-		ECD_03012	0.63	-0.3
3,160,530	-		ECD_03012	0.63	-0.3
3,160,530	-		ECD_03012	0.63	-0.0
3,160,620	+		ECD_03012	0.71	-1.3
3,160,620	+		ECD_03012	0.71	+0.7
3,160,620	+		ECD_03012	0.71	-0.1
3,160,620	+		ECD_03012	0.71	+0.0
3,160,621	-		ECD_03012	0.72	-0.2
3,160,621	-		ECD_03012	0.72	+1.0
3,160,621	-		ECD_03012	0.72	-0.1
3,160,621	-		ECD_03012	0.72	+0.1
3,160,635	-		ECD_03012	0.73	+0.3
3,160,677	-		ECD_03012	0.77	+0.2
3,160,690	+		ECD_03012	0.78	+0.4
3,160,690	+		ECD_03012	0.78	+0.2
3,160,691	-		ECD_03012	0.78	+0.1
3,160,698	+		ECD_03012	0.79	-0.4
3,160,784	+		ECD_03012	0.86	+0.5
3,160,784	+		ECD_03012	0.86	+0.0
3,160,785	-		ECD_03012	0.87	-0.6
3,160,859	+				-0.6
3,160,976	-				-0.6
3,160,997	-				+0.6
3,160,997	-				-0.3
3,160,997	-				-0.1
3,161,000	+				-0.1
3,161,000	-				+0.3
3,161,001	-				+0.3
3,161,001	-				-1.6
3,161,001	-				+0.3
3,161,001	-				+0.9
3,161,001	-				-0.4
3,161,001	-				+1.5
3,161,003	-				+1.7
3,161,077	-		ECD_03013	0.12	-0.7
3,161,109	+		ECD_03013	0.16	-1.4
3,161,304	-		ECD_03013	0.38	+0.2
3,161,304	-		ECD_03013	0.38	+0.8
3,161,308	-		ECD_03013	0.39	+0.3
3,161,308	-		ECD_03013	0.39	+0.5
3,161,330	-		ECD_03013	0.41	-0.7
3,161,368	-		ECD_03013	0.46	+0.4
3,161,414	-		ECD_03013	0.51	+1.0
3,161,513	+		ECD_03013	0.63	+0.3
3,161,734	-		ECD_03013	0.88	-0.6
3,161,734	-		ECD_03013	0.88	-0.1
3,161,785	-				+0.3
3,161,792	-				+0.6
3,161,810	+				+0.3
3,161,894	-				-0.0
3,161,894	-				+1.5
3,161,898	+				-0.1
3,161,899	-				+0.4
3,162,010	+				-0.4
3,162,010	+				+0.7
3,162,011	-				-0.1
3,162,011	-				+0.4
3,162,011	-				+0.2
3,162,011	-				+0.9
3,162,011	-				-0.8
3,162,011	-				+0.8
3,162,011	-				-0.0
3,162,011	-				-0.0
3,162,011	-				-0.0
3,162,011	-				+0.8
3,162,012	+				+0.2
3,162,012	+				+0.5
3,162,012	+				-0.1
3,162,012	+				-0.8
3,162,013	-				+0.7
3,162,047	-				+0.2
3,162,047	-				+0.1
3,162,079	-				+0.3
3,162,098	+				-0.1
3,162,129	+		ECD_03014	0.11	+0.3
3,162,156	+		ECD_03014	0.13	-0.6
3,162,164	+		ECD_03014	0.13	-0.4
3,162,164	+		ECD_03014	0.13	-0.2
3,162,223	-		ECD_03014	0.16	-0.1
3,162,287	+		ECD_03014	0.19	+0.3
3,162,359	+		ECD_03014	0.23	+0.3
3,162,359	+		ECD_03014	0.23	+0.0
3,162,469	-		ECD_03014	0.28	+0.0
3,162,710	+		ECD_03014	0.40	+0.1
3,162,782	+		ECD_03014	0.43	-1.5
3,162,782	+		ECD_03014	0.43	-0.2
3,162,807	-		ECD_03014	0.45	-1.1
3,162,807	-		ECD_03014	0.45	-0.7