Strain Fitness in Escherichia coli BL21 around ECD_02211

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
2,288,399	+		ECD_02209	0.69	-1.0
2,288,399	+		ECD_02209	0.69	-0.4
2,288,402	-		ECD_02209	0.70	-1.2
2,288,402	-		ECD_02209	0.70	-1.9
2,288,420	+		ECD_02209	0.71	-0.6
2,288,421	-		ECD_02209	0.71	-1.2
2,288,422	+		ECD_02209	0.71	-0.8
2,288,423	-		ECD_02209	0.71	+0.0
2,288,423	-		ECD_02209	0.71	-1.4
2,288,431	+		ECD_02209	0.72	+0.3
2,288,512	+		ECD_02209	0.78	+0.2
2,288,512	+		ECD_02209	0.78	-1.3
2,288,541	-		ECD_02209	0.80	-0.4
2,288,691	-				-1.2
2,288,809	+				-1.1
2,288,810	-				+1.4
2,288,811	+				-0.6
2,288,926	+		ECD_02210	0.24	-0.9
2,288,927	-		ECD_02210	0.25	-1.3
2,289,011	-		ECD_02210	0.41	-1.8
2,289,078	+		ECD_02210	0.55	-1.1
2,289,079	-		ECD_02210	0.55	-0.8
2,289,079	-		ECD_02210	0.55	-1.0
2,289,116	-		ECD_02210	0.62	-1.9
2,289,220	-		ECD_02210	0.83	-0.7
2,289,304	+				-1.4
2,289,305	-				-0.8
2,289,305	-				+0.5
2,289,305	-				-1.5
2,289,328	-				-0.9
2,289,339	+				-0.4
2,289,470	+				-1.6
2,289,474	-				-1.5
2,289,474	-				-1.0
2,289,474	-				-0.7
2,289,577	-		ECD_02211	0.15	+0.5
2,289,577	-		ECD_02211	0.15	-1.9
2,289,720	-		ECD_02211	0.23	-2.1
2,289,780	-		ECD_02211	0.26	-1.1
2,290,071	-		ECD_02211	0.42	-0.4
2,290,089	+		ECD_02211	0.43	-1.9
2,290,132	-		ECD_02211	0.46	-0.8
2,290,132	-		ECD_02211	0.46	-3.4
2,290,144	-		ECD_02211	0.46	-1.0
2,290,145	+		ECD_02211	0.46	+0.4
2,290,250	+		ECD_02211	0.52	+0.1
2,290,298	+		ECD_02211	0.55	+0.2
2,290,298	+		ECD_02211	0.55	+0.6
2,290,298	+		ECD_02211	0.55	+0.6
2,290,299	-		ECD_02211	0.55	-0.4
2,290,299	-		ECD_02211	0.55	-0.7
2,290,307	+		ECD_02211	0.55	-0.5
2,290,308	-		ECD_02211	0.56	-0.4
2,290,669	-		ECD_02211	0.76	-0.1
2,290,879	+		ECD_02211	0.87	+1.1
2,291,097	+				-1.0
2,291,142	-				-0.8
2,291,162	-				-0.5
2,291,229	+				-1.5
2,291,230	-				-1.0
2,291,230	-				-1.3
2,291,373	-		ECD_02212	0.26	-2.5
2,291,403	+		ECD_02212	0.30	-1.4
2,291,405	+		ECD_02212	0.30	-1.7
2,291,405	+		ECD_02212	0.30	-0.8
2,291,406	-		ECD_02212	0.31	-0.8
2,291,406	-		ECD_02212	0.31	-1.5
2,291,406	-		ECD_02212	0.31	-1.9
2,291,406	-		ECD_02212	0.31	+0.4
2,291,455	-		ECD_02212	0.38	-0.4
2,291,460	-		ECD_02212	0.39	-1.1
2,291,460	-		ECD_02212	0.39	-0.4
2,291,460	-		ECD_02212	0.39	-1.1
2,291,460	-		ECD_02212	0.39	-0.2
2,291,460	-		ECD_02212	0.39	-2.0
2,291,463	+		ECD_02212	0.39	-1.1
2,291,463	+		ECD_02212	0.39	-1.9
2,291,525	+		ECD_02212	0.49	+0.5
2,291,526	-		ECD_02212	0.49	-1.7
2,291,526	-		ECD_02212	0.49	-3.6
2,291,612	-		ECD_02212	0.62	-0.1
2,291,695	-		ECD_02212	0.74	-1.4
2,291,727	+		ECD_02212	0.79	-1.3
2,291,856	+				-1.6
2,291,856	+				-0.5
2,291,856	+				-0.6
2,291,857	-				-2.1
2,291,857	-				-1.2
2,291,857	-				-0.7
2,291,858	+				-0.4
2,291,922	+				-1.6
2,291,979	-		ECD_02213	0.22	-0.5