Strain Fitness in Escherichia coli BL21 around ECD_02057
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
2,109,643 | + | -0.3 | |||
2,109,773 | + | -0.3 | |||
2,110,000 | - | ECD_02056 | 0.37 | -1.6 | |
2,110,091 | + | ECD_02056 | 0.49 | +0.2 | |
2,110,173 | + | ECD_02056 | 0.61 | -0.2 | |
2,110,174 | - | ECD_02056 | 0.61 | +0.0 | |
2,110,250 | + | ECD_02056 | 0.71 | +1.2 | |
2,110,359 | - | ECD_02056 | 0.86 | +0.2 | |
2,110,359 | - | ECD_02056 | 0.86 | -0.2 | |
2,110,519 | + | -0.4 | |||
2,110,527 | + | -0.2 | |||
2,110,528 | - | -0.2 | |||
2,110,603 | + | ECD_02057 | 0.77 | -0.7 | |
2,110,609 | + | -0.3 | |||
2,110,706 | - | ECD_02058 | 0.13 | -0.2 | |
2,110,849 | - | ECD_02058 | 0.33 | +0.0 | |
2,111,073 | - | ECD_02058 | 0.64 | -0.4 | |
2,111,514 | - | ECD_02059 | 0.18 | +0.6 | |
2,111,527 | - | ECD_02059 | 0.20 | +0.2 | |
2,111,560 | - | ECD_02059 | 0.23 | -1.7 |
Or see this region's nucleotide sequence