Strain Fitness in Escherichia coli BL21 around ECD_01976
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
---|---|---|---|---|---|
remove | |||||
2,047,554 | - | ECD_01975 | 0.65 | +0.5 | |
2,047,573 | + | ECD_01975 | 0.67 | +0.1 | |
2,047,573 | + | ECD_01975 | 0.67 | +1.2 | |
2,047,579 | - | ECD_01975 | 0.67 | -0.7 | |
2,047,883 | - | ECD_01975 | 0.89 | +0.1 | |
2,048,050 | + | -0.2 | |||
2,048,419 | - | ECD_01976 | 0.20 | +0.7 | |
2,048,619 | - | ECD_01976 | 0.30 | +0.3 | |
2,048,828 | - | ECD_01976 | 0.41 | +0.8 | |
2,049,058 | - | ECD_01976 | 0.53 | -0.4 | |
2,049,131 | - | ECD_01976 | 0.56 | -0.1 | |
2,049,217 | + | ECD_01976 | 0.61 | -0.9 | |
2,049,218 | - | ECD_01976 | 0.61 | +1.4 | |
2,049,235 | - | ECD_01976 | 0.62 | +0.2 | |
2,049,460 | + | ECD_01976 | 0.73 | +0.8 | |
2,049,538 | - | ECD_01976 | 0.77 | +0.8 | |
2,049,621 | - | ECD_01976 | 0.82 | +0.6 | |
2,049,677 | + | ECD_01976 | 0.84 | +0.7 | |
2,049,678 | - | ECD_01976 | 0.84 | -0.1 | |
2,049,963 | - | +0.4 | |||
2,049,963 | - | -0.1 | |||
2,049,963 | - | +0.9 | |||
2,050,068 | + | ECD_01977 | 0.12 | +0.5 | |
2,050,475 | + | ECD_01977 | 0.66 | -0.8 | |
2,050,497 | - | ECD_01977 | 0.69 | -0.7 | |
2,050,677 | + | +0.7 | |||
2,050,678 | - | -0.0 | |||
2,050,844 | + | ECD_01978 | 0.17 | -1.0 |
Or see this region's nucleotide sequence