Strain Fitness in Escherichia coli BL21 around ECD_01582
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
|---|---|---|---|---|---|
| remove | |||||
| 1,632,818 | - | ECD_01581 | 0.54 | -0.1 | |
| 1,632,818 | - | ECD_01581 | 0.54 | +0.1 | |
| 1,632,891 | - | ECD_01581 | 0.58 | +1.0 | |
| 1,632,995 | - | ECD_01581 | 0.65 | -0.4 | |
| 1,632,995 | - | ECD_01581 | 0.65 | -0.1 | |
| 1,633,064 | - | ECD_01581 | 0.69 | +0.8 | |
| 1,633,111 | + | ECD_01581 | 0.72 | +0.6 | |
| 1,633,112 | - | ECD_01581 | 0.72 | +0.3 | |
| 1,633,116 | - | ECD_01581 | 0.72 | -0.7 | |
| 1,633,116 | - | ECD_01581 | 0.72 | -0.9 | |
| 1,633,160 | - | ECD_01581 | 0.75 | -2.2 | |
| 1,633,169 | - | ECD_01581 | 0.75 | -0.0 | |
| 1,633,322 | - | ECD_01581 | 0.85 | -0.9 | |
| 1,633,325 | + | ECD_01581 | 0.85 | +0.3 | |
| 1,633,511 | - | +0.1 | |||
| 1,633,514 | - | +0.5 | |||
| 1,633,967 | + | ECD_01582 | 0.16 | +0.3 | |
| 1,634,541 | + | ECD_01582 | 0.65 | -0.9 | |
| 1,634,762 | + | ECD_01582 | 0.84 | -0.7 | |
| 1,635,048 | + | -1.2 | |||
| 1,635,054 | + | +0.0 | |||
| 1,635,054 | + | -0.5 |
Or see this region's nucleotide sequence