Strain Fitness in Escherichia coli BL21 around ECD_01160
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
|---|---|---|---|---|---|
| remove | |||||
| 1,219,857 | + | ECD_01159 | 0.41 | -0.4 | |
| 1,219,857 | + | ECD_01159 | 0.41 | +0.2 | |
| 1,220,567 | - | +0.1 | |||
| 1,220,918 | + | ECD_01160 | 0.51 | -1.2 | |
| 1,220,919 | - | ECD_01160 | 0.51 | +0.4 | |
| 1,220,942 | - | ECD_01160 | 0.55 | -0.8 | |
| 1,220,943 | + | ECD_01160 | 0.56 | -0.1 | |
| 1,220,943 | + | ECD_01160 | 0.56 | -0.3 | |
| 1,220,944 | - | ECD_01160 | 0.56 | -1.3 | |
| 1,220,944 | - | ECD_01160 | 0.56 | -0.5 | |
| 1,220,944 | - | ECD_01160 | 0.56 | +1.0 | |
| 1,220,967 | + | ECD_01160 | 0.60 | -0.5 | |
| 1,221,042 | + | ECD_01160 | 0.74 | -1.0 | |
| 1,221,047 | - | ECD_01160 | 0.75 | -0.2 | |
| 1,221,304 | - | -0.1 | |||
| 1,221,425 | - | +1.5 | |||
| 1,221,632 | - | ECD_01161 | 0.20 | -1.1 | |
| 1,222,102 | - | ECD_01161 | 0.50 | +0.9 |
Or see this region's nucleotide sequence