Strain Fitness in Escherichia coli BL21 around ECD_01028

Experiment: Mixed culture, Halobacteriovorax-10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01027 and ECD_01028 are separated by 40 nucleotidesECD_01028 and ECD_01029 are separated by 47 nucleotidesECD_01029 and ECD_t00024 are separated by 401 nucleotides ECD_01027: ECD_01027 - diguanylate cyclase, membrane-anchored, at 1,097,159 to 1,098,517 _01027 ECD_01028: ECD_01028 - putative transposase for IS3, at 1,098,558 to 1,099,373 _01028 ECD_01029: ECD_01029 - putative transposase-related protein, at 1,099,421 to 1,099,729 _01029 ECD_t00024: ECD_t00024 - tRNA-Ser, at 1,100,131 to 1,100,218 _t00024 Position (kb) 1098 1099 1100Strain fitness (log2 ratio) -2 -1 0 1at 1098.370 kb on + strand, within ECD_01027at 1098.535 kb on - strandat 1099.904 kb on + strandat 1100.253 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10
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1,098,370 + ECD_01027 0.89 -1.9
1,098,535 - -0.4
1,099,904 + +0.4
1,100,253 - +1.0

Or see this region's nucleotide sequence