Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00753 and ECD_00754 are separated by 204 nucleotides ECD_00754 and ECD_00755 are separated by 35 nucleotides ECD_00755 and ECD_00756 overlap by 1 nucleotides
ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580
_00753
ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498
_00754
ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490
_00755
ECD_00756: ECD_00756 - cardiolipin synthase 2, at 806,490 to 807,731
_00756
Position (kb) 805
806
807 Strain fitness (log2 ratio) -2
-1
0
1
2 at 804.907 kb on + strand, within ECD_00754 at 805.512 kb on + strand at 805.512 kb on + strand at 805.524 kb on + strand at 805.677 kb on + strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.759 kb on - strand, within ECD_00755 at 805.793 kb on + strand, within ECD_00755 at 805.793 kb on + strand, within ECD_00755 at 805.996 kb on - strand, within ECD_00755 at 806.097 kb on + strand, within ECD_00755 at 806.097 kb on + strand, within ECD_00755 at 806.307 kb on - strand, within ECD_00755 at 806.403 kb on - strand at 806.814 kb on - strand, within ECD_00756 at 806.854 kb on - strand, within ECD_00756 at 806.915 kb on - strand, within ECD_00756 at 806.915 kb on - strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.919 kb on - strand, within ECD_00756 at 806.919 kb on - strand, within ECD_00756 at 806.921 kb on - strand, within ECD_00756 at 806.921 kb on - strand, within ECD_00756 at 807.257 kb on + strand, within ECD_00756 at 807.326 kb on + strand, within ECD_00756 at 807.326 kb on + strand, within ECD_00756 at 807.327 kb on - strand, within ECD_00756 at 807.327 kb on - strand, within ECD_00756 at 807.452 kb on - strand, within ECD_00756
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10 remove 804,907 + ECD_00754 0.17 +2.5 805,512 + -0.4 805,512 + -0.0 805,524 + +0.7 805,677 + ECD_00755 0.15 +0.5 805,678 - ECD_00755 0.15 +0.1 805,678 - ECD_00755 0.15 +0.5 805,678 - ECD_00755 0.15 -0.4 805,678 - ECD_00755 0.15 +0.2 805,678 - ECD_00755 0.15 -0.4 805,759 - ECD_00755 0.24 +0.3 805,793 + ECD_00755 0.27 +0.8 805,793 + ECD_00755 0.27 -0.1 805,996 - ECD_00755 0.48 +0.1 806,097 + ECD_00755 0.59 +0.4 806,097 + ECD_00755 0.59 -1.9 806,307 - ECD_00755 0.81 -0.5 806,403 - +0.1 806,814 - ECD_00756 0.26 -1.2 806,854 - ECD_00756 0.29 +0.4 806,915 - ECD_00756 0.34 -0.2 806,915 - ECD_00756 0.34 +1.0 806,918 + ECD_00756 0.34 -0.0 806,918 + ECD_00756 0.34 -0.1 806,918 + ECD_00756 0.34 -0.4 806,919 - ECD_00756 0.35 -1.2 806,919 - ECD_00756 0.35 +0.0 806,921 - ECD_00756 0.35 +0.2 806,921 - ECD_00756 0.35 +0.0 807,257 + ECD_00756 0.62 +1.2 807,326 + ECD_00756 0.67 -0.9 807,326 + ECD_00756 0.67 +0.9 807,327 - ECD_00756 0.67 +1.0 807,327 - ECD_00756 0.67 +0.8 807,452 - ECD_00756 0.77 +1.4
Or see this region's nucleotide sequence